Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G305000.1 | Wheat | cytosol | 95.68 | 95.81 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 95.42 | 89.36 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 87.31 | 86.96 |
| Os04t0433900-00 | Rice | nucleus | 53.95 | 58.71 |
| EES12185 | Sorghum | nucleus | 51.96 | 56.75 |
| Zm00001d003648_P002 | Maize | nucleus | 51.23 | 56.65 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 25.51 | 40.55 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.83 | 36.7 |
| Solyc07g062600.2.1 | Tomato | nucleus | 20.8 | 27.43 |
| CDX98519 | Canola | nucleus | 18.41 | 24.8 |
| Bra027290.1-P | Field mustard | nucleus | 18.14 | 24.51 |
| CDX97621 | Canola | nucleus | 18.07 | 24.42 |
| AT3G14980.2 | Thale cress | nucleus | 19.27 | 24.39 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 22.79 | 24.22 |
| KRH21991 | Soybean | nucleus | 20.86 | 23.9 |
| KRH27324 | Soybean | nucleus | 20.66 | 23.72 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 24.45 | 22.47 |
| TraesCS3B01G451700.2 | Wheat | nucleus | 10.43 | 22.3 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 9.17 | 21.07 |
| TraesCS3B01G582800.1 | Wheat | nucleus | 12.23 | 17.13 |
| TraesCS7B01G489100.1 | Wheat | nucleus, plastid | 9.97 | 14.35 |
| TraesCS5B01G391200.1 | Wheat | nucleus | 13.16 | 14.16 |
| TraesCS2B01G257600.3 | Wheat | nucleus | 13.42 | 13.5 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 12.16 | 13.49 |
| TraesCS4B01G204700.1 | Wheat | cytosol | 7.57 | 11.24 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | ncoils:Coil |
| InterPro:GNAT_dom | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 |
| InterPro:IDM1 | InterPro:IPR000182 | InterPro:IPR002219 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas |
| InterPro:PE/DAG-bd | PFAM:PF16135 | PFscan:PS50016 | PFscan:PS50081 | PFscan:PS51186 | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF1 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2B01G321800 | EnsemblPlants:TraesCS2B01G321800.1 |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | TIGR:cd15532 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:459249794..459261116
Molecular Weight (calculated)
167992.0 Da
IEP (calculated)
5.986
GRAVY (calculated)
-0.475
Length
1505 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEVDFLVGI GMKEEDIATM LFGEKVAELR EDTFDGSEKE KQILEGIFGS GQTTSLPGAI KALVPASTPS GSASNNRMVY CRIVESFTHG SLSSYHVLYH
0101: SASQQMQNAM PCTDHHGSGR PSECELVVQE TPPSGDRVYT RRAVIRRSQR AKQCSVLDWE RVDINSVVAQ RRDGRGGFGM LWNHLRLHAH LLMMDAGWKI
0201: EGRERGDKSK VDLMFESPDK EIRLASLPKA WKCFGQWLLI HSSRFDGNYY GKEWFNMYDF CYDLKNTLLC LEHEVRRPKQ SLSFLHQWQL LDPFMAVVCI
0301: DKKVAALRNG VALKAVNSRV TILNCSDIKL LSRLSRRNVN KPVAIKYSSN SNDTHPKSRR SLLPLLLSDG QPHKEENSLH NEQSFIFGTS KHSQYEVQQR
0401: YLTMEEMNER SVRNIPHRIV KGFQDATEPS SMPTCFSTKR EFPYCKMVQD TRDEFDPPYF PPSYASDQLD ENVQIKGPSS HAGEAMEIAA DMGNSADSPS
0501: DELLIRPDLL FSHEVDEMIL GTTDGVSNEH HAAAIVSDYQ AGTEDGRGGP SSGTLSLPEE TDARLEAIRD DVNNEHDIVV PGFQAGIVHV RDEPSAGALS
0601: LLAEKDTPLE VIRDDINNEH DVVVVPGFQV GNDDVRGGPS SGTLSLLKAK GTNLEAKDMG LEQMTKTGWV PSGATGGPLK ISEPQVLFVS PQDGRLSFMN
0701: NRTFNQDTLS CLNFSHDSMG ANMQLDIQTS AYEASLIQGF LYLDSEGSPI GWEVINPEPP NQMICGPSSE PNSKVSGHCG ELNMQNEART SEQREISESD
0801: PSKNGKKRSE KVAGIKDDAL RKKQKVNSVH ASHCAIGKNM DITTEVPASC VVHNGKEQIG ATSSEHASSN QKRSQEAADI QDEVREKKQK VNDGLISDSI
0901: IGQCMDGSTA EIPTRCVTRC EEVQISASSS EQVHLTLVPE IKEHKEQAED SSEPPKQLVS EQPPKKDVKF RKKQPWRRKC RFDEDDLLMT AVIHRLTARY
1001: RNHYNRMLIN RIGLKSLPRS RLQNEKKCVR QKFPKSARTV LSKLLEMGIV CTMNILQYRR PGPKNVLKDG NITEHGIRCR CCDTIFTMSN FRCHAGLKQE
1101: TLTLNLFLGS GKSYSLCQLQ AWFIEQKKRK ERAKDTMSVQ ADENDDTCGL CGDVGELICC DNCPASYHQA CLPCQEVPDG SWYCSSCLCN VCGEVVNSKA
1201: PGGLLHALEC SQCEYRYHVK CISGKVVCDQ RSGLGTWFCE RRCQQIYTSM RSRVGIPDHL DDGFSCTILR NNDDQKVHSA SDIALLAECS MKLIIALSIL
1301: EECFLPIFDP RTGVDIMPPI VYNWRSEFVH LDYKGFYTVV LEKDDNILSV ASIRLHGTTV AEMPLIATCS ENRQQGMCRQ LVDYIEEMLK SLEVEMLLLF
1401: AIPNIVDTWT SAFGFRLIEE SDKKKLSKVR LVSIPGTVLL KKDLYERSPE TEAGELRTEQ QQPLEDTGPV CTTETNLADE LGGSDTNLPL ADPPSAVALG
1501: KCHVD
0101: SASQQMQNAM PCTDHHGSGR PSECELVVQE TPPSGDRVYT RRAVIRRSQR AKQCSVLDWE RVDINSVVAQ RRDGRGGFGM LWNHLRLHAH LLMMDAGWKI
0201: EGRERGDKSK VDLMFESPDK EIRLASLPKA WKCFGQWLLI HSSRFDGNYY GKEWFNMYDF CYDLKNTLLC LEHEVRRPKQ SLSFLHQWQL LDPFMAVVCI
0301: DKKVAALRNG VALKAVNSRV TILNCSDIKL LSRLSRRNVN KPVAIKYSSN SNDTHPKSRR SLLPLLLSDG QPHKEENSLH NEQSFIFGTS KHSQYEVQQR
0401: YLTMEEMNER SVRNIPHRIV KGFQDATEPS SMPTCFSTKR EFPYCKMVQD TRDEFDPPYF PPSYASDQLD ENVQIKGPSS HAGEAMEIAA DMGNSADSPS
0501: DELLIRPDLL FSHEVDEMIL GTTDGVSNEH HAAAIVSDYQ AGTEDGRGGP SSGTLSLPEE TDARLEAIRD DVNNEHDIVV PGFQAGIVHV RDEPSAGALS
0601: LLAEKDTPLE VIRDDINNEH DVVVVPGFQV GNDDVRGGPS SGTLSLLKAK GTNLEAKDMG LEQMTKTGWV PSGATGGPLK ISEPQVLFVS PQDGRLSFMN
0701: NRTFNQDTLS CLNFSHDSMG ANMQLDIQTS AYEASLIQGF LYLDSEGSPI GWEVINPEPP NQMICGPSSE PNSKVSGHCG ELNMQNEART SEQREISESD
0801: PSKNGKKRSE KVAGIKDDAL RKKQKVNSVH ASHCAIGKNM DITTEVPASC VVHNGKEQIG ATSSEHASSN QKRSQEAADI QDEVREKKQK VNDGLISDSI
0901: IGQCMDGSTA EIPTRCVTRC EEVQISASSS EQVHLTLVPE IKEHKEQAED SSEPPKQLVS EQPPKKDVKF RKKQPWRRKC RFDEDDLLMT AVIHRLTARY
1001: RNHYNRMLIN RIGLKSLPRS RLQNEKKCVR QKFPKSARTV LSKLLEMGIV CTMNILQYRR PGPKNVLKDG NITEHGIRCR CCDTIFTMSN FRCHAGLKQE
1101: TLTLNLFLGS GKSYSLCQLQ AWFIEQKKRK ERAKDTMSVQ ADENDDTCGL CGDVGELICC DNCPASYHQA CLPCQEVPDG SWYCSSCLCN VCGEVVNSKA
1201: PGGLLHALEC SQCEYRYHVK CISGKVVCDQ RSGLGTWFCE RRCQQIYTSM RSRVGIPDHL DDGFSCTILR NNDDQKVHSA SDIALLAECS MKLIIALSIL
1301: EECFLPIFDP RTGVDIMPPI VYNWRSEFVH LDYKGFYTVV LEKDDNILSV ASIRLHGTTV AEMPLIATCS ENRQQGMCRQ LVDYIEEMLK SLEVEMLLLF
1401: AIPNIVDTWT SAFGFRLIEE SDKKKLSKVR LVSIPGTVLL KKDLYERSPE TEAGELRTEQ QQPLEDTGPV CTTETNLADE LGGSDTNLPL ADPPSAVALG
1501: KCHVD
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.