Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G563500.2 | Wheat | nucleus | 86.67 | 84.85 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 88.49 | 84.35 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 86.6 | 84.07 |
| Os04t0691700-01 | Rice | nucleus | 19.62 | 79.19 |
| Zm00001d012354_P001 | Maize | cytosol | 13.58 | 68.57 |
| OQU82646 | Sorghum | nucleus | 47.3 | 55.17 |
| Zm00001d026698_P011 | Maize | nucleus | 45.53 | 54.07 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.89 | 38.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.06 | 31.68 |
| Solyc07g062600.2.1 | Tomato | nucleus | 19.43 | 27.08 |
| KRH27324 | Soybean | nucleus | 22.08 | 26.77 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 23.77 | 26.69 |
| KRH21991 | Soybean | nucleus | 22.01 | 26.64 |
| AT3G14980.2 | Thale cress | nucleus | 19.37 | 25.9 |
| CDX98519 | Canola | nucleus | 17.67 | 25.16 |
| CDX97621 | Canola | nucleus | 17.42 | 24.87 |
| Bra027290.1-P | Field mustard | nucleus | 17.3 | 24.69 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 2.77 | 24.31 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 22.52 | 23.69 |
| HORVU7Hr1G122600.9 | Barley | cytosol, nucleus | 8.68 | 18.45 |
| HORVU5Hr1G094760.8 | Barley | nucleus | 13.08 | 15.41 |
| HORVU2Hr1G054040.7 | Barley | nucleus | 12.08 | 13.17 |
| HORVU4Hr1G059010.32 | Barley | plastid | 6.42 | 10.52 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | UniProt:A0A287JTS6 | InterPro:Acyl_CoA_acyltransferase |
| InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU2Hr1G126690 | EnsemblPlants:HORVU2Hr1G126690.2 |
| InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF16135 | PFscan:PS50016 |
| PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF15 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 |
| UniParc:UPI000B460979 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:-:764279329..764290099
Molecular Weight (calculated)
174603.0 Da
IEP (calculated)
6.691
GRAVY (calculated)
-0.523
Length
1590 amino acids
Sequence
(BLAST)
(BLAST)
0001: PPPFRGEHIV SAQVHAGAGL GPEARMHAHR QQSIVTTEGR VDLGVSKGHA HSYNVQQHGT AAQEHAHCYK EQHGTAAQEH AHRYNDQHET AAREEQEHAG
0101: RHGEQNGGVD GLALELDAVL QGFLGYWPGG GTAGSCNQQQ VFGAAAVGVG STVDMRMQAM AEDTIAAGTC DAVGFAGSSS TSGVEDPMPS YMDALAEFSQ
0201: FQSDPSPADP FLYQWLQDQQ PFASDASCLS YDQGQIVDTS QALYTCSPAD LSDRGAKEYP LFSKPTYDAA VPPCLSHDYI GSGQFLETEH LREKGTPGAN
0301: TSSLDDVDVP QSSSLQSVPS VVCTKRTLGR DLPDQLEAHA QCLFKDAGWT IKPRKRNDRA KMASYFTAPH REVVLSSLTQ AWKFCGNKLY EASPGSQRGK
0401: HPMEWSDIDK FWKDLTDTME YIQKVLVNQH NALTLLQRWE LLDPFIAVVF IGRKITALQQ GSTLRAVDSS IIVLDENKNM PSESKRKQKA SDTLTARKVQ
0501: STPVIMGSDC GERAVESCSR SQAVPSCHVL EGGQNRDINL KNGYTQGQNC GAIDRNENHI NQSTETQQFY SGAALINNSV KKARKKPKMI SDVDANGLDG
0601: LYAQILMQHT MGNVFNQESN VAMLDFSNPE NINLSGKHGI YSSVGTLKKH LKAESRPLKL NGNSQSDKPG MLLHPESKHM SMLKRDGTIK EPLEHPTSGP
0701: DSDARESGAN ETTPIELVQK NIPSESNQMI MLRGQGTLKE PTEHTLSEPD SDARESGANG TAPIEMVHKN KKLPLESNQM SVLRGEGTVK EPTEHTISEP
0801: YSNARESGAN EKVPTEMVQK KIPSESNQMS MLRVEGTVKE PMEHTISQPA SSARESGANE TVPIEMVQKK LPSESKQSML RGEGTAMEHK SPEPDSNARV
0901: SGANEIAPVE MVYQELPSGS KKSMLRGEGT VKEPTEHTIS KPDSNSRESS ANGIVPSEMV HKKLPSLKES SPRTPPKDPT KVSVDNAVAV ELSLESNAAP
1001: LKTDLSQDSQ ICKTTAAKRK PEGCDKHIKK RPLELRIHDD DLLITAIVKN RDVDSYNKFA ASPDFSVAKY KKLKGQKRAT KLLGKGGTNL LGGKRISLAR
1101: KTVLCWLIAT GFLTVKDVIQ YRNLKSNEVI KDGQVTWEGI LCRCCAKTLS VSDFKAHAGC CLPKSSLGLF LQSGKSYTLC QVEAWSAELM SRKSDACGRK
1201: VEAMDESDDT CGFCGDGGEL LCCDNCPSTY HEACLSAQEL PEGSWYCHNC TCRNCGTPVS EKEVSSSSDI LKCVQCGDAY HDMCINHEML PCDDKSSNTW
1301: FCGRYCKEIF VGLHSHIGTE NIIDNGLSWT ILKCCSDGRR LHSARKIAHM TECNTKLAVA LTLLEECFIR MFDPRTGVDM IPHVLYNKGS NFARLDYQGF
1401: YTVILEKGDE ILCVASIRLH GTKAAELPFI ATCVDYRRKG MCRRLLDIIE KMLRSFHVEM LVLSAIPELV NTWVSGFDFK PIKDDERKQL RNVNLMLFPG
1501: TSLLTKRLDG TVTAKPEKEE GTCNVSVLPN GKCLPNGKAN GHLELHDLEL PDELNNEAAM DGSFRTLKRE CSPAAWFNST KVCFISNMRL
0101: RHGEQNGGVD GLALELDAVL QGFLGYWPGG GTAGSCNQQQ VFGAAAVGVG STVDMRMQAM AEDTIAAGTC DAVGFAGSSS TSGVEDPMPS YMDALAEFSQ
0201: FQSDPSPADP FLYQWLQDQQ PFASDASCLS YDQGQIVDTS QALYTCSPAD LSDRGAKEYP LFSKPTYDAA VPPCLSHDYI GSGQFLETEH LREKGTPGAN
0301: TSSLDDVDVP QSSSLQSVPS VVCTKRTLGR DLPDQLEAHA QCLFKDAGWT IKPRKRNDRA KMASYFTAPH REVVLSSLTQ AWKFCGNKLY EASPGSQRGK
0401: HPMEWSDIDK FWKDLTDTME YIQKVLVNQH NALTLLQRWE LLDPFIAVVF IGRKITALQQ GSTLRAVDSS IIVLDENKNM PSESKRKQKA SDTLTARKVQ
0501: STPVIMGSDC GERAVESCSR SQAVPSCHVL EGGQNRDINL KNGYTQGQNC GAIDRNENHI NQSTETQQFY SGAALINNSV KKARKKPKMI SDVDANGLDG
0601: LYAQILMQHT MGNVFNQESN VAMLDFSNPE NINLSGKHGI YSSVGTLKKH LKAESRPLKL NGNSQSDKPG MLLHPESKHM SMLKRDGTIK EPLEHPTSGP
0701: DSDARESGAN ETTPIELVQK NIPSESNQMI MLRGQGTLKE PTEHTLSEPD SDARESGANG TAPIEMVHKN KKLPLESNQM SVLRGEGTVK EPTEHTISEP
0801: YSNARESGAN EKVPTEMVQK KIPSESNQMS MLRVEGTVKE PMEHTISQPA SSARESGANE TVPIEMVQKK LPSESKQSML RGEGTAMEHK SPEPDSNARV
0901: SGANEIAPVE MVYQELPSGS KKSMLRGEGT VKEPTEHTIS KPDSNSRESS ANGIVPSEMV HKKLPSLKES SPRTPPKDPT KVSVDNAVAV ELSLESNAAP
1001: LKTDLSQDSQ ICKTTAAKRK PEGCDKHIKK RPLELRIHDD DLLITAIVKN RDVDSYNKFA ASPDFSVAKY KKLKGQKRAT KLLGKGGTNL LGGKRISLAR
1101: KTVLCWLIAT GFLTVKDVIQ YRNLKSNEVI KDGQVTWEGI LCRCCAKTLS VSDFKAHAGC CLPKSSLGLF LQSGKSYTLC QVEAWSAELM SRKSDACGRK
1201: VEAMDESDDT CGFCGDGGEL LCCDNCPSTY HEACLSAQEL PEGSWYCHNC TCRNCGTPVS EKEVSSSSDI LKCVQCGDAY HDMCINHEML PCDDKSSNTW
1301: FCGRYCKEIF VGLHSHIGTE NIIDNGLSWT ILKCCSDGRR LHSARKIAHM TECNTKLAVA LTLLEECFIR MFDPRTGVDM IPHVLYNKGS NFARLDYQGF
1401: YTVILEKGDE ILCVASIRLH GTKAAELPFI ATCVDYRRKG MCRRLLDIIE KMLRSFHVEM LVLSAIPELV NTWVSGFDFK PIKDDERKQL RNVNLMLFPG
1501: TSLLTKRLDG TVTAKPEKEE GTCNVSVLPN GKCLPNGKAN GHLELHDLEL PDELNNEAAM DGSFRTLKRE CSPAAWFNST KVCFISNMRL
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSNKHLDA RDEKGSALHG FPTSDIARET IPLHLVESSN KGVSTSSYLL
0101: KHSIVKGREV YLGGIVSGKC KSLNLDKCDG KEFKAIASPV SQESFATRMI SVGASTPHSE KACFPLQLNN GSKVSPNELI MSKTCLKIDP KEDPRPLLYK
0201: YVCKVLTAAR WKIEKRERSA GRKHVDTFYI SPEGRKFREF GSAWKALGGI LLADRKLMDT GTKKWTGIND FWSDLSLTLL DIEENMKNLN LANTRALWWS
0301: ALEPFVVVVF ISKQVGSLRK GNKVEVARNS NPDKLKKEDT ICLNLISGCP ESVLTVSEGS HLVHDVDANQ EIHSDLEVQT KISSQKVSSR LERQSIIGKE
0401: ISGTHEQEAS KGIVASKLIA EDMHESVMRK NLHRRSKKIS DIKPASLDQH DSLDSNSLNS FEFQDKEMGN IHLVSKGSRD ERLRNEKMNN SCCNSKKGRK
0501: KARKHYTQDD DLMGSTITRN KGKFSRSSQK KKTQKPKART KKRNNRGGCR LLPRSSSNVE NHFFQGNWSI LGPRTVLSWL IATKVISRDE VIQLRDPDDD
0601: TVVKTGLVTK DGVVCTCCNK TVSLSEFKNH AGFNQNCPCL NLFMGSGKPF ASCQLEAWSA EYKARRNGWR LEKASDDDPN DDSCGVCGDG GELICCDNCP
0701: STFHQACLSM QVLPEGSWYC SSCTCWICSE LVSDNAERSQ DFKCSQCAHK YHGTCLQGIS KRRKLFPETY FCGKNCEKVY NGLSSRVGII NPNADGLSWS
0801: ILKCFQEDGM VHSARRLALK AECNSKLAVA LSIMEESFLS MVDPRTGIDM IPHVLYNWGS TFARLDFDGF YTVVVEKDDV MISVASIRVH GVTIAEMPLV
0901: ATCSKYRRQG MCRILVAAIE EMLMSLKVEK LVVAALPSLV ETWTEGFGFK PMDDEERDAL KRINLMVFPG TTLLKKTLYE STKPSTMKGV CLSKERNNPS
1001: NKEADLEPGL DKAGSPMSTQ VESCDQMVPA GSDDEPSPGF PVPLGADQTE PTSETENPSR DSNANDRPNK TTVVSIGEEE EEECLQKDVS KLSEEGKETT
1101: RASSSSAALE EVSGLGLGVV NNVSDEMLLC VDEQLDSDSS QDSE
0101: KHSIVKGREV YLGGIVSGKC KSLNLDKCDG KEFKAIASPV SQESFATRMI SVGASTPHSE KACFPLQLNN GSKVSPNELI MSKTCLKIDP KEDPRPLLYK
0201: YVCKVLTAAR WKIEKRERSA GRKHVDTFYI SPEGRKFREF GSAWKALGGI LLADRKLMDT GTKKWTGIND FWSDLSLTLL DIEENMKNLN LANTRALWWS
0301: ALEPFVVVVF ISKQVGSLRK GNKVEVARNS NPDKLKKEDT ICLNLISGCP ESVLTVSEGS HLVHDVDANQ EIHSDLEVQT KISSQKVSSR LERQSIIGKE
0401: ISGTHEQEAS KGIVASKLIA EDMHESVMRK NLHRRSKKIS DIKPASLDQH DSLDSNSLNS FEFQDKEMGN IHLVSKGSRD ERLRNEKMNN SCCNSKKGRK
0501: KARKHYTQDD DLMGSTITRN KGKFSRSSQK KKTQKPKART KKRNNRGGCR LLPRSSSNVE NHFFQGNWSI LGPRTVLSWL IATKVISRDE VIQLRDPDDD
0601: TVVKTGLVTK DGVVCTCCNK TVSLSEFKNH AGFNQNCPCL NLFMGSGKPF ASCQLEAWSA EYKARRNGWR LEKASDDDPN DDSCGVCGDG GELICCDNCP
0701: STFHQACLSM QVLPEGSWYC SSCTCWICSE LVSDNAERSQ DFKCSQCAHK YHGTCLQGIS KRRKLFPETY FCGKNCEKVY NGLSSRVGII NPNADGLSWS
0801: ILKCFQEDGM VHSARRLALK AECNSKLAVA LSIMEESFLS MVDPRTGIDM IPHVLYNWGS TFARLDFDGF YTVVVEKDDV MISVASIRVH GVTIAEMPLV
0901: ATCSKYRRQG MCRILVAAIE EMLMSLKVEK LVVAALPSLV ETWTEGFGFK PMDDEERDAL KRINLMVFPG TTLLKKTLYE STKPSTMKGV CLSKERNNPS
1001: NKEADLEPGL DKAGSPMSTQ VESCDQMVPA GSDDEPSPGF PVPLGADQTE PTSETENPSR DSNANDRPNK TTVVSIGEEE EEECLQKDVS KLSEEGKETT
1101: RASSSSAALE EVSGLGLGVV NNVSDEMLLC VDEQLDSDSS QDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.