CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30263	Soybean	nucleus	94.4	77.07
KRH72700	Soybean	nucleus	50.9	43.86
KRH17051	Soybean	nucleus	48.57	43.6
VIT_06s0004g06800.t01	Wine grape	nucleus	29.36	39.32
Zm00001d008232_P001	Maize	cytosol	12.99	38.44
KRH52096	Soybean	nucleus	22.81	35.76
HORVU4Hr1G056300.1	Barley	extracellular	6.65	34.81
VIT_06s0004g06810.t01	Wine grape	nucleus	43.4	34.54
PGSC0003DMT400056776	Potato	nucleus	43.29	33.69
Solyc09g031580.2.1	Tomato	nucleus	42.24	32.98
KXG31496	Sorghum	cytosol, extracellular	3.59	32.38
Solyc03g071550.1.1	Tomato	nucleus	32.31	31.78
PGSC0003DMT400043562	Potato	nucleus	30.73	31.66
GSMUA_AchrUn_...	Banana	nucleus	31.36	30.87
GSMUA_Achr6P32880_001	Banana	nucleus	32.95	29.43
TraesCS2A01G085100.1	Wheat	nucleus	19.54	28.73
TraesCS2D01G083000.1	Wheat	nucleus	19.22	28.17
TraesCS2B01G099800.1	Wheat	nucleus	19.32	27.94
Zm00001d028749_P002	Maize	mitochondrion	35.06	26.08
Zm00001d022583_P001	Maize	nucleus	18.9	25.57
TraesCS4A01G109600.1	Wheat	nucleus	35.06	24.45
TraesCS4B01G194600.1	Wheat	nucleus	34.95	24.39
TraesCS4D01G195300.1	Wheat	nucleus	34.74	24.24
KRH67232	Soybean	nucleus	15.63	23.45
KRG96074	Soybean	nucleus	13.73	22.15
KRH32595	Soybean	nucleus	15.21	18.46
KRH19970	Soybean	nucleus	11.62	16.52
KRH27632	Soybean	nucleus	16.05	16.36
KRH77859	Soybean	nucleus	18.16	15.64
KRH27635	Soybean	nucleus	20.91	15.11
KRH77858	Soybean	nucleus	21.01	15.09
KRH26543	Soybean	nucleus	15.52	14.97
KRH71410	Soybean	nucleus	18.59	14.92
KRH19715	Soybean	nucleus	13.94	14.85
KRH32312	Soybean	nucleus	13.94	14.81
KRH22815	Soybean	nucleus	15.63	14.7
KRH21991	Soybean	nucleus	19.01	13.7
KRH27324	Soybean	nucleus	18.9	13.65
KRH27633	Soybean	cytosol, nucleus	4.54	12.91

Protein Annotations

EntrezGene:100818931	MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	EMBL:ACUP02006942	InterPro:Acyl_CoA_acyltransferase
InterPro:Agenet-like_dom	InterPro:Agenet_dom_plant	EnsemblPlantsGene:GLYMA_11G170900	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008080	GO:GO:0016740	GO:GO:0046872	InterPro:IPR000182	InterPro:IPR013083
InterPro:IPR019787	InterPro:Jas	UniProt:K7LQW1	ProteinID:KRH30258.1	EnsemblPlants:KRH30259	ProteinID:KRH30259
ProteinID:KRH30259.1	PFAM:PF00583	PFAM:PF00628	PFAM:PF05641	PFAM:PF16135	PFscan:PS50016
PFscan:PS51186	PANTHER:PTHR42672	PANTHER:PTHR42672:SF9	SMART:SM00249	SMART:SM00743	SUPFAM:SSF55729
SUPFAM:SSF57903	UniParc:UPI000295598B	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:18345392..18359356

Molecular Weight (calculated)

108328.0 Da

IEP (calculated)

6.916

GRAVY (calculated)

-0.361

Length

947 amino acids

Sequence
(BLAST)

001: MEIVHNNYSP RNRKRKRGFS RKLGVNEKVE VRSVDLGFLG SWHPATVIQC EKLKRHVRYN NVLDDGGVNY LEEAVSVLEA LDGDKECYSY SRGSIRPMPP
101: LVEFERGDLK FGLCVDVNYE KAWWEGVIFD DHSDGMEKRS VFFPDLGDEM QVGIHQLRIT QDWHEVTEEW EQRGNWVFLD LVEEQKRKSF VAVSAKQIWY
201: DVRIKNGFEK IQEWTCNMKY LWRNLVMEVI NDYLSLTINE VISVLNLQLF PPTISSSLVE DEVEDVPMFC PEAVEQYYRS YISNMSRADK KQWILKAKNH
301: LLAEGWIFDY PPPTNKKRGI IYISPLKRRF STLHAACRFC MGKSIFKLAR SDMKHLNVSG MNEENVDQVW SRDLVYRSAG NRKRKRLENS KANIQKVSAS
401: SSLTNHKPLN VLSYLIDNSI ILPRCKVYYK VKGRHRKVCT LADGKITRDG IKCNCCMGIY SFVGFENHAS GNSTCRPSAS IFLEDGRSLL DCLIKMMHDH
501: KTMETSGKSF SGLSLVENDY ICSVCHYGGE LILCDKCPSS FHKTCLGLED IPNGDWFCPS CCCGICGQRK IDRDDEVEQL LPCIQCEHKY HVRCLENGAA
601: DISTRYLGNW FCGKDCEKIY EGLHKLLGEP VSVGVDNLTW TLVKFIHPDR FEHDSSKSDL LAESYSKLHL AISVMHECFE PLKESLSNRD LVEDVIFSRW
701: SELNRLNFQG FYTVLLERNE ELISVATVRV YGKKVAEIPL VGTRLQYRRL GMCHILIEEL EKKLKQLGVE RLVLPAVPSV LETWTRSFGF AKMTNLERSQ
801: FLDYTFLDFQ GAIMCQKLLT NNNPSPNPVL LTESQAKCDV SSGSCCANLS ESSPVCELYQ VEEIDLGGMM NHQMEYTCAG KNNQVIGAID PVTIVEQPSP
901: GDQQCQNGTT SLECSIDKQV ETNNGLYKCV YTRRKVRKSC EGFSMPS

Best Arabidopsis Sequence Match ( AT5G58610.4 )
(BLAST)

001: MLGVIEDNLK ITIDQFLHDF DAERYPQLKL LNEASQAVYE TNACLSGMLT IAPQEHQFSC IDKDFKPASQ RCQSLSVLTS VSGIRSEASD INKATEISSK
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.