Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43768 | Canola | nucleus | 94.12 | 91.72 |
| CDX73252 | Canola | cytosol | 22.66 | 53.89 |
| CDX81205 | Canola | nucleus | 57.73 | 48.45 |
| CDY60050 | Canola | nucleus | 58.61 | 48.21 |
| AT5G63900.1 | Thale cress | nucleus | 54.68 | 45.06 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 27.67 | 44.56 |
| Zm00001d008232_P001 | Maize | cytosol | 20.91 | 30.0 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 10.24 | 25.97 |
| KRH52096 | Soybean | nucleus | 33.12 | 25.17 |
| KXG31496 | Sorghum | cytosol, extracellular | 5.23 | 22.86 |
| CDY68599 | Canola | cytosol | 11.98 | 19.86 |
| Zm00001d022583_P001 | Maize | nucleus | 27.67 | 18.14 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 23.97 | 17.08 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 23.97 | 16.79 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 23.53 | 16.72 |
| CDX71404 | Canola | extracellular, golgi, vacuole | 18.3 | 16.37 |
| CDY18439 | Canola | nucleus | 21.57 | 15.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.59 | 15.07 |
| CDX93373 | Canola | nucleus | 21.35 | 14.96 |
| CDY10104 | Canola | nucleus | 24.84 | 11.61 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 26.58 | 11.51 |
| CDX80351 | Canola | golgi, plasma membrane | 24.62 | 11.26 |
| CDX74615 | Canola | nucleus | 23.97 | 11.02 |
| Zm00001d028749_P002 | Maize | mitochondrion | 30.5 | 11.0 |
| CDY47291 | Canola | nucleus | 25.49 | 10.88 |
| CDX77146 | Canola | nucleus | 21.13 | 10.52 |
| CDY37657 | Canola | nucleus | 24.4 | 10.52 |
| CDX98519 | Canola | nucleus | 24.84 | 10.21 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 29.85 | 10.1 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 29.85 | 10.1 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 29.85 | 10.09 |
| CDX97621 | Canola | nucleus | 24.4 | 10.05 |
| CDY04521 | Canola | nucleus | 20.48 | 9.82 |
| CDY52116 | Canola | nucleus | 29.19 | 9.38 |
| CDY30516 | Canola | nucleus | 21.35 | 9.34 |
| CDY63985 | Canola | nucleus | 20.7 | 9.28 |
| CDY70414 | Canola | cytosol, nucleus | 7.41 | 5.35 |
Protein Annotations
| EnsemblPlants:CDX84460 | EnsemblPlantsGene:GSBRNA2T00141673001 | Gene3D:3.30.40.10 | GO:A0A078D5Q0 | InterPro:IPR013083 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | ProteinID:CDX84460 | ProteinID:CDX84460.1 |
| SEG:seg | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0004EE6ECA | MapMan:15.5.30 | : |
Description
BnaC03g50400D
Coordinates
chrLK031837:+:1275841..1277220
Molecular Weight (calculated)
51609.3 Da
IEP (calculated)
6.428
GRAVY (calculated)
-0.491
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSCLFITV EAERNPESLR KWLTIAKERK TTTKGAQHFS LKAKKHLSAL GWRFAYVSKG TSRELRYKSP EGKWFNSLVT ACGACLEDED DDDSSTQEQD
101: DNLEAPASGG VPKKKRTKVC DTAPFTGDKN RSSHLAKKIL NEQAEKASDE AELTPKPRFG KSKRTNCDVC CVCHLGGDDL LRCNGCPSAF HPACWSIAPD
201: EQDWFFCTCC FCDICNQRRT PGTSMLLTCE QCHRRCHRNC LEPPEPLIDL PWFCSSQCSS VFSALQKLQG TKIALVGDEG LVWSLMRVPN DGEQQLDSAV
301: KMLQRSFKPT PDRFSGRDLV EELIFSKDSD GVGRTFYTVS IERNNNPIIV VAMRVGKDVA EIPLLATLTR DSYDRISSMC RALMDELEKQ MSEIGVRRLV
401: LPALADDVHT WTQQFGFSHM ESSERLELLK HGLFDFVGTV MCHKFLKGRE EQGESSPTD
101: DNLEAPASGG VPKKKRTKVC DTAPFTGDKN RSSHLAKKIL NEQAEKASDE AELTPKPRFG KSKRTNCDVC CVCHLGGDDL LRCNGCPSAF HPACWSIAPD
201: EQDWFFCTCC FCDICNQRRT PGTSMLLTCE QCHRRCHRNC LEPPEPLIDL PWFCSSQCSS VFSALQKLQG TKIALVGDEG LVWSLMRVPN DGEQQLDSAV
301: KMLQRSFKPT PDRFSGRDLV EELIFSKDSD GVGRTFYTVS IERNNNPIIV VAMRVGKDVA EIPLLATLTR DSYDRISSMC RALMDELEKQ MSEIGVRRLV
401: LPALADDVHT WTQQFGFSHM ESSERLELLK HGLFDFVGTV MCHKFLKGRE EQGESSPTD
001: MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMZ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.