Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G416700.1 | Wheat | nucleus, plastid | 79.87 | 88.3 |
| TraesCS3B01G451700.2 | Wheat | nucleus | 78.84 | 86.79 |
| OQU88240 | Sorghum | cytosol | 22.45 | 46.4 |
| Os01t0965700-00 | Rice | endoplasmic reticulum, extracellular | 11.23 | 42.03 |
| Zm00001d042003_P001 | Maize | plastid | 36.52 | 35.96 |
| KXG21396 | Sorghum | plastid | 40.9 | 34.05 |
| Zm00001d037529_P001 | Maize | nucleus | 40.77 | 33.37 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 17.68 | 21.21 |
| TraesCS5D01G396100.1 | Wheat | nucleus | 22.19 | 12.55 |
| TraesCS2D01G238100.1 | Wheat | nucleus | 23.48 | 12.15 |
| TraesCS7D01G543000.1 | Wheat | nucleus | 16.26 | 11.37 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 18.71 | 10.69 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 22.06 | 10.25 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 19.61 | 9.46 |
| TraesCS4D01G205600.2 | Wheat | cytosol | 12.39 | 9.4 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | ncoils:Coil | InterPro:GNAT_dom |
| InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF16135 | ScanProsite:PS01359 |
| PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF5 | SMART:SM00249 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS3D01G412200 | EnsemblPlants:TraesCS3D01G412200.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:524759130..524772142
Molecular Weight (calculated)
83285.0 Da
IEP (calculated)
8.289
GRAVY (calculated)
-0.430
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIETKNKGK EAVSAMEKGK EVVPLLDEVP LTDEDVVVEE PHSGKCRNYG HYHEGGPTHF CKAESREVPN KNARDCRVGA TREEKGDRLP KHCGSRVTPV
101: AGRGSSFRPL SMQSNGNTPP LFSLGSGRGM PPPAVYSRKQ GASADGGPSA VQRDGGGNHL PSSTDVGHGQ PVSERPLQIV PANTRAGTGK NMPPAGGNGG
201: SAVPANGRVR KTRAPKGSST LGESRKVPGK KSDAGEPAGM HHGTQDNNQL KTVSAPSNSR NRKSTASASA VPSSRRPRRN NSSMSGTAAA RAKKHTILTW
301: LIDSGVLKEN EKVSYVDSTS FATKASGAVT RAGIQCTCCN TAMAPPTFSS HAGSEDSTPW ERLLLKSGKS LLECVREAWQ GEDLRTLHAK QKARAALEKE
401: RERSTQEKKR ALLLAKQSRK EPALALDGTN YGGDDDRSDD ACGVCADGGQ LLCCDSCPST FHPECLAVKV PEDCWVCHYC RCFLCSADDD GHGGLSDCNQ
501: CTRKYHQHCR APLLAGHEIG PYCSEACNKI AVNLSNMVGA TTSIGEEGHS WSLLKIQRGS MTSDSAALLE CNAKLAVAFG VLDLCFNPVK DRLTGIDMIR
601: QAVYSVESDF KRLSYEGFYT IVLQKDTEII SVALLRFHGA KLVEMPFACT LPQYHRQGMM RRLVNAIDKV LESVQVENLV ISAVAEVVDT WKKLGFMTVD
701: PQLRDEAKRL SMVTIAGTIL LQKPTALPMT EDELAFLEMG WPLCSFVDLL NGIAFPWPPY ADPVAAAVRG AGGKA
101: AGRGSSFRPL SMQSNGNTPP LFSLGSGRGM PPPAVYSRKQ GASADGGPSA VQRDGGGNHL PSSTDVGHGQ PVSERPLQIV PANTRAGTGK NMPPAGGNGG
201: SAVPANGRVR KTRAPKGSST LGESRKVPGK KSDAGEPAGM HHGTQDNNQL KTVSAPSNSR NRKSTASASA VPSSRRPRRN NSSMSGTAAA RAKKHTILTW
301: LIDSGVLKEN EKVSYVDSTS FATKASGAVT RAGIQCTCCN TAMAPPTFSS HAGSEDSTPW ERLLLKSGKS LLECVREAWQ GEDLRTLHAK QKARAALEKE
401: RERSTQEKKR ALLLAKQSRK EPALALDGTN YGGDDDRSDD ACGVCADGGQ LLCCDSCPST FHPECLAVKV PEDCWVCHYC RCFLCSADDD GHGGLSDCNQ
501: CTRKYHQHCR APLLAGHEIG PYCSEACNKI AVNLSNMVGA TTSIGEEGHS WSLLKIQRGS MTSDSAALLE CNAKLAVAFG VLDLCFNPVK DRLTGIDMIR
601: QAVYSVESDF KRLSYEGFYT IVLQKDTEII SVALLRFHGA KLVEMPFACT LPQYHRQGMM RRLVNAIDKV LESVQVENLV ISAVAEVVDT WKKLGFMTVD
701: PQLRDEAKRL SMVTIAGTIL LQKPTALPMT EDELAFLEMG WPLCSFVDLL NGIAFPWPPY ADPVAAAVRG AGGKA
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.