Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88240 | Sorghum | cytosol | 45.41 | 25.07 |
| Zm00001d042003_P001 | Maize | plastid | 47.34 | 12.45 |
| TraesCS3B01G451700.2 | Wheat | nucleus | 41.06 | 12.07 |
| TraesCS3A01G416700.1 | Wheat | nucleus, plastid | 40.58 | 11.98 |
| Os04t0691700-01 | Rice | nucleus | 21.74 | 11.42 |
| KXG21396 | Sorghum | plastid | 51.21 | 11.39 |
| TraesCS3D01G412200.1 | Wheat | peroxisome | 42.03 | 11.23 |
| Zm00001d037529_P001 | Maize | nucleus | 51.21 | 11.19 |
| Os07t0173400-01 | Rice | cytosol | 23.67 | 9.76 |
| TraesCS3B01G582800.1 | Wheat | nucleus | 49.28 | 9.5 |
| TraesCS3A01G514100.1 | Wheat | plastid | 48.79 | 9.43 |
| Os03t0747600-02 | Rice | nucleus | 26.57 | 7.19 |
| Os06t0731100-00 | Rice | nucleus | 2.9 | 4.96 |
| Os04t0433900-00 | Rice | nucleus | 22.22 | 3.33 |
| Os06t0101000-01 | Rice | nucleus, plastid | 14.98 | 3.02 |
| Os03t0278700-01 | Rice | cytosol, nucleus | 10.14 | 2.21 |
| Os07t0173700-00 | Rice | plastid | 0.48 | 0.68 |
| Os07t0173501-00 | Rice | cytosol, extracellular | 0.48 | 0.66 |
| Os03t0794700-01 | Rice | plasma membrane | 0.48 | 0.66 |
Protein Annotations
| EnsemblPlants:Os01t0965700-00 | EnsemblPlantsGene:Os01g0965700 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 |
| GO:GO:0016740 | GO:GO:0046872 | InterPro:Acyl_CoA_acyltransferase | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF5 | ProteinID:BAS76373.1 |
| SEG:seg | SUPFAM:SSF55729 | UniParc:UPI000393BEF5 | UniProt:A0A0P0VD75 | MapMan:35.1 | : |
Description
Hypothetical conserved gene. (Os01t0965700-00)
Coordinates
chr1:+:42582894..42583645
Molecular Weight (calculated)
22865.9 Da
IEP (calculated)
9.511
GRAVY (calculated)
-0.052
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: SSEFVILECL GKNAFLYLFQ LLLSNQCPAL FFCYRFHGRK LAEMPFAGTL PAYQKQGMMR RLVKAVEKVL ASLQVENLVI PAVADLVETW KRSFSFRPMQ
101: AEVRDEAKKL SLVAITGTTL LQKPISAHQQ QPVPSRKGSS SSRSKRASAP ATVTGSSKEE EEQMTTTAAR LTDDELAFLE MAPLCSFTDL LAGGVYPTGL
201: QLLRGMK
101: AEVRDEAKKL SLVAITGTTL LQKPISAHQQ QPVPSRKGSS SSRSKRASAP ATVTGSSKEE EEQMTTTAAR LTDDELAFLE MAPLCSFTDL LAGGVYPTGL
201: QLLRGMK
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGKANSSL PLSRTNFI
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGKANSSL PLSRTNFI
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.