Factsheet for Bra016284.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46445	Canola	cytosol	98.26	98.26
AT1G26730.1	Thale cress	cytosol	81.95	81.73
AT1G35350.1	Thale cress	cytosol	81.42	81.09
Bra024691.1-P	Field mustard	cytosol	79.95	78.07
Bra010468.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.44	66.03
Bra019690.1-P	Field mustard	cytosol	59.36	54.81
Bra017394.1-P	Field mustard	cytosol	58.56	54.34
Bra019688.1-P	Field mustard	cytosol	56.28	54.18
Bra026863.1-P	Field mustard	cytosol	58.29	54.16
Bra017395.1-P	Field mustard	cytosol, nucleus, plasma membrane	57.89	53.66
Bra024782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.09	53.31
Bra026864.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.35	52.96
Bra024783.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.55	52.88
Bra026565.1-P	Field mustard	cytosol	57.49	52.83
Bra024784.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.28	52.32
Bra019686.1-P	Field mustard	cytosol	56.68	52.28
Bra017393.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.66	48.2
Bra004383.1-P	Field mustard	cytosol	49.06	46.75
Bra033080.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.13	45.74
Bra019689.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.32	45.69
Bra036222.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.06	44.28
Bra014948.1-P	Field mustard	cytosol	33.56	32.02
Bra023727.1-P	Field mustard	cytosol	33.02	31.51
Bra004334.1-P	Field mustard	cytosol	32.22	31.3
Bra038357.1-P	Field mustard	cytosol	32.75	31.05
Bra004017.1-P	Field mustard	cytosol	29.01	29.01
Bra035386.1-P	Field mustard	golgi, plasma membrane, plastid	14.17	23.25
Bra022884.1-P	Field mustard	plasma membrane	13.64	22.62
Bra012265.1-P	Field mustard	cytosol	3.88	13.62

Protein Annotations

MapMan:24.2.7.4	MapMan:25.3.2.2	EnsemblPlantsGene:Bra016284	EnsemblPlants:Bra016284.1	EnsemblPlants:Bra016284.1-P	ncoils:Coil
InterPro:EXS_C	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR004331	InterPro:IPR004342
UniProt:M4DIF7	PFAM:PF03105	PFAM:PF03124	InterPro:PHO1_SPX	PFscan:PS51380	PFscan:PS51382
PANTHER:PTHR10783	PANTHER:PTHR10783:SF43	InterPro:SPX_dom	TMHMM:TMhelix	UniParc:UPI0002546027	SEG:seg

Description

AT1G35350 (E=0.0) | LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342), SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: EXS family protein / ERD1/XPR1/SYG1 family protein (TAIR:AT1G26730.1); Has 734 Blast hits to 697 proteins in 158 species: Archae - 0; Bacteria - 21; Metazoa - 234; Fungi - 245; Plants - 125; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).

Coordinates

chrA08:+:17691659..17695157

Molecular Weight (calculated)

87078.8 Da

IEP (calculated)

9.716

GRAVY (calculated)

-0.089

Length

748 amino acids

Sequence
(BLAST)

001: MKFGEEFDGQ MVPEWQQAYM NYPCLKSILQ EIQNSRERSR TAGALRPKKS VYRNFSGLTK RYSRAASYLD LENQDIMVST RIGEDGFERY ETSIMRVAEA
101: GRESELVFFK TLDLEFDKVN HFYRSKVDEM VKDAVGLNKQ MDALFAFRIK VDRPTSPWTS SETVSVDVNA LDSKEQRRKS LADEMGIEIK ESNGGDSIKE
201: STPEALSVLD RIKLNKTQET PLSTIRNILK LSHQEELKFT RENLKKIEER LKKAFIEFYR KLRHLKNYSF LNTLAISKIM KKYDKISSRN AAKPYMEMVD
301: KSYLTSSDEI NKLMVRVESI FVEHFASSNR SKGMNLLRPI VKKERHRITF STGFFVGCSV SLVIALVLFI HARNIMGTAG QKLYMETMFP LYSLFGFIVL
401: HMIMYASNIY FWKKYRVNYA FIFGFKEGTE LGYRPVLLLS FGLGTLALAA VLINLDMEMD PNTNDYKTIT ELLPLFVVAI VMAISVCPFN IFYRSSRFFF
501: LAVIFRCIAA PLYKVSLPDF FLADQLTSQV QALRSLQFYV CYYGWGDFRL RRNTCRSSDV YNTFNFIVAV IPYWSRFLQC VRRLIEEQAI SQGFHALKYL
601: LPIVAVCLRT AYSLNRGNNW RLAAWVFSAL ATFYGTYWDI VHDWGFLHNP SKTWLREKLL VPNKAVYYVA MVVNVVLRLA WLQTVLDFNS SFLHRETMIA
701: LLAFLEIIRR GIWNFFRLEN EHLNNVGKFR AFTSVPLPFN YGEEEESR

Best Arabidopsis Sequence Match ( AT1G35350.1 )
(BLAST)

001: MKFGKEYVAQ MIPEWQQAYM DYTCLKTILR EIKTSQKRSE SQGVLKRKLS GRRNFSGLTK RYSRTFSSRD LENHDIMVHA TTGDDGFEKY ETTILKVSEV
101: GRESELVFFK TLDLEFDKVN RFYRSNVEEL VKEAVVLNRQ MDALIAYRIK LDQPSTSWSC SETVSVDINA LDSKEQKGKT LAEEMGIKVE ENVSNGGDST
201: KETAPEALSV LDRIRLNKNQ ENPLSTIRNV LKLSNKEDIK FTKENLKKIE ERLKNVFIEF YRKLRHLKNY SFLNTLAISK IMKKYDKIAL RNAAKLYMEM
301: VDKSYLTSSD EINKLMLRVE SIFVEHFAGS NRSKGMNLLR PKVTKEKHRI TFSTGFFVGC TVSLVIALGL FIHARNIMGA VGHKLYMETM FPLYSLFAFV
401: VLHMIMYASN IYFWKRYRVN YPFIFGFKEG TELGYGHVLL LSFGLGTLAL CAVLVNMDME MDPNTNDYKT ITELVPLFVV ALVIAISVCP FNIFYRSSRF
501: FFLMVLFRCI AAPLYKVNLP DFFLADQLTS QVQALRSLEF YICYYGWGDF KQRQSTCKSS DVYSTFYFIV AVIPYWSRFL QCVRRLIEEK DVSQGFNALK
601: YLLTIVAVCL RTAFSINRGN DWKIAAWVFS GLATFYGTYW DIVYDWGLLH RPSKSWLREK LLVPHKSVYY VAMVVNVVLR LAWLQTVLDF NISFLHRETM
701: VALIAILEII RRGIWNFFRL ENEHLNNVGK FRAFKSVPLP FNYDEEEDRD S

Arabidopsis Description

PHO1-H8Phosphate transporter PHO1 homolog 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.