Factsheet for Bra012265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82438	Canola	cytosol	78.87	83.17
KRH26831	Soybean	plasma membrane	30.99	29.33
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	35.21	27.37
Bra022884.1-P	Field mustard	plasma membrane	47.89	22.62
AT2G32295.2	Thale cress	plasma membrane	43.66	20.09
VIT_12s0059g02490.t01	Wine grape	plastid	36.15	16.31
Bra035386.1-P	Field mustard	golgi, plasma membrane, plastid	34.27	16.01
Os12t0595000-01	Rice	plasma membrane	31.46	15.88
Solyc04g080050.2.1	Tomato	golgi, peroxisome, plasma membrane, plastid	34.74	15.64
TraesCS5A01G062900.1	Wheat	plasma membrane	30.99	15.57
TraesCS5D01G074100.1	Wheat	plasma membrane	30.99	15.57
EES17313	Sorghum	plasma membrane	30.52	15.4
GSMUA_Achr7P00360_001	Banana	plasma membrane	34.27	15.37
TraesCS5B01G070200.1	Wheat	plasma membrane	30.52	15.33
TraesCS7B01G271100.2	Wheat	plasma membrane	30.52	15.01
TraesCS7A01G356800.1	Wheat	plasma membrane	30.52	15.01
TraesCS7D01G365900.3	Wheat	plasma membrane	30.52	15.01
GSMUA_Achr4P23610_001	Banana	plasma membrane	33.33	14.88
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	31.92	14.75
KRH22527	Soybean	plasma membrane	32.39	14.65
Zm00001d030939_P004	Maize	plasma membrane	30.99	14.54
Zm00001d041383_P002	Maize	plasma membrane	30.52	14.32
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	31.46	13.35
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	25.82	12.17
Bra024784.1-P	Field mustard	cytosol, nucleus, plasma membrane	14.55	3.99
Bra017394.1-P	Field mustard	cytosol	15.02	3.97
Bra017395.1-P	Field mustard	cytosol, nucleus, plasma membrane	15.02	3.97
Bra016284.1-P	Field mustard	cytosol	13.62	3.88
Bra019688.1-P	Field mustard	cytosol	13.15	3.6
Bra017393.1-P	Field mustard	cytosol, peroxisome, plasma membrane	12.21	3.59
Bra019686.1-P	Field mustard	cytosol	13.62	3.58
Bra014948.1-P	Field mustard	cytosol	13.15	3.57
Bra023727.1-P	Field mustard	cytosol	13.15	3.57
Bra036222.1-P	Field mustard	cytosol, nucleus, plasma membrane	13.15	3.52
Bra019689.1-P	Field mustard	cytosol, nucleus, plasma membrane	12.21	3.5
Bra019690.1-P	Field mustard	cytosol	13.15	3.46
Bra026864.1-P	Field mustard	cytosol, peroxisome, plasma membrane	13.15	3.46
Bra026565.1-P	Field mustard	cytosol	13.15	3.44
Bra010468.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.74	3.42
Bra024691.1-P	Field mustard	cytosol	12.21	3.39
Bra026863.1-P	Field mustard	cytosol	12.21	3.23
KRH30768	Soybean	golgi, plasma membrane	3.29	3.21
Bra004017.1-P	Field mustard	cytosol	11.27	3.21
Bra033080.1-P	Field mustard	cytosol, nucleus, plasma membrane	11.74	3.18
Bra024783.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.74	3.12
Bra024782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.74	3.12
Bra004383.1-P	Field mustard	cytosol	11.27	3.06
Bra038357.1-P	Field mustard	cytosol	11.27	3.04
Bra004334.1-P	Field mustard	cytosol	9.39	2.6
OQU79488	Sorghum	golgi, plasma membrane	0.0	0.0
KRH26830	Soybean	endoplasmic reticulum, golgi	0.0	0.0

Protein Annotations

KEGG:00230+1.17.4.1	KEGG:00240+1.17.4.1	KEGG:00480+1.17.4.1	KEGG:00983+1.17.4.1	Gene3D:1.10.620.20	MapMan:35.1
EnsemblPlantsGene:Bra012265	EnsemblPlants:Bra012265.1	EnsemblPlants:Bra012265.1-P	InterPro:EXS_C	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	InterPro:IPR004342	InterPro:IPR012348	UniProt:M4D705	PFAM:PF00268
PFAM:PF03124	PANTHER:PTHR23409	PANTHER:PTHR23409:SF31	InterPro:RNR-like	InterPro:RNR_small_fam	SUPFAM:SSF47240
TMHMM:TMhelix	UniParc:UPI0002541526	:	:	:	:

Description

AT2G32295 (E=6e-044) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS family protein / ERD1/XPR1/SYG1 family protein (TAIR:AT5G35730.1); Has 582 Blast hits to 577 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 223; Fungi - 177; Plants - 106; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

Coordinates

chrA07:+:8969889..8970999

Molecular Weight (calculated)

24919.4 Da

IEP (calculated)

5.280

GRAVY (calculated)

0.262

Length

213 amino acids

Sequence
(BLAST)

001: MRTKLTEEHV KSTVCDAVEI EREFVCDALP CALVWMTREL MSQYIEFVVD RLLGALGYGK VYGVANPFDW MELILLQGKT NFFEKRVGDY QKASIGWESV
101: MKMGQDTREL FFYETFLYYN PLLLITMMVW LWGVNLWVFS RTGVDYAAIF YLGPDHHSHK EIWKCARWMT TTILTSMTAY LYLHVLGCFS TSVIDASSLI
201: FRDILYSLCF IEF

Best Arabidopsis Sequence Match ( AT3G27060.1 )
(BLAST)

001: MPSMPEEPLL TPTPDRFCMF PIHYPQIWEM YKKAEASFWT AEEVDLSQDN RDWENSLNDG ERHFIKHVLA FFAASDGIVL ENLASRFMSD VQVSEARAFY
101: GFQIAIENIH SEMYSLLLDT YIKDNKERDH LFRAIETIPC VAKKAQWAMK WIDGSQTFAE RIIAFACVEG IFFSGSFCSI FWLKKRGLMP GLTFSNELIS
201: RDEGLHCDFA CLLYTLLKTK LSEERVKSIV CDAVEIEREF VCDALPCALV GMNRDLMSQY IEFVADRLLG ALGYGKVYGV TNPFDWMELI SLQGKTNFFE
301: KRVGDYQKAS VMSSVNGNGA FDNHVFSLDE DF

Arabidopsis Description

TSO2TSO2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.