Factsheet for GSMUA_Achr4P23610_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00360_001	Banana	plasma membrane	89.94	90.32
EES17313	Sorghum	plasma membrane	69.39	78.44
Os12t0595000-01	Rice	plasma membrane	68.97	77.96
TraesCS5A01G062900.1	Wheat	plasma membrane	67.92	76.42
TraesCS5D01G074100.1	Wheat	plasma membrane	67.71	76.18
TraesCS5B01G070200.1	Wheat	plasma membrane	67.3	75.71
OQU79488	Sorghum	golgi, plasma membrane	34.59	75.69
VIT_12s0059g02490.t01	Wine grape	plastid	74.63	75.42
KRH26830	Soybean	endoplasmic reticulum, golgi	36.27	75.22
KRH40514	Soybean	plasma membrane	65.62	74.52
TraesCS7A01G356800.1	Wheat	plasma membrane	67.51	74.36
KRH00677	Soybean	plasma membrane	65.41	74.29
TraesCS7B01G271100.2	Wheat	plasma membrane	67.3	74.13
TraesCS7D01G365900.3	Wheat	plasma membrane	66.88	73.67
CDX74638	Canola	golgi, plasma membrane, plastid	69.81	73.03
Bra035386.1-P	Field mustard	golgi, plasma membrane, plastid	69.81	73.03
Zm00001d030939_P004	Maize	plasma membrane	69.39	72.91
CDY33680	Canola	golgi, plasma membrane, plastid	70.02	72.45
AT5G35730.1	Thale cress	plastid	69.39	72.43
Zm00001d041383_P002	Maize	plasma membrane	67.92	71.37
Solyc04g080050.2.1	Tomato	golgi, peroxisome, plasma membrane, plastid	69.6	70.19
KRH22527	Soybean	plasma membrane	69.18	70.06
KRH30768	Soybean	golgi, plasma membrane	31.24	68.35
KRH26831	Soybean	plasma membrane	31.45	66.67
Solyc07g022830.2.1	Tomato	golgi, plasma membrane, plastid	64.36	66.59
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	37.53	65.33
HORVU5Hr1G016790.15	Barley	peroxisome, plastid	68.55	65.14
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	59.96	63.27
AT2G32295.2	Thale cress	plasma membrane	57.44	59.18
Bra022884.1-P	Field mustard	plasma membrane	55.56	58.76
CDX84739	Canola	plasma membrane, plastid	56.39	57.97
CDY65458	Canola	plasma membrane, plastid	56.18	57.63
CDY71691	Canola	endoplasmic reticulum, extracellular, plasma membrane	15.72	55.15
CDX84740	Canola	plasma membrane	35.22	54.19
CDY58360	Canola	endoplasmic reticulum, plasma membrane	15.72	51.72
CDX98567	Canola	golgi, nucleus, plasma membrane	21.59	50.49
CDX76897	Canola	mitochondrion	11.53	45.83
CDX81844	Canola	cytosol	13.84	36.67
CDX82438	Canola	cytosol	15.09	35.64
Bra012265.1-P	Field mustard	cytosol	14.88	33.33
CDY22918	Canola	cytosol	15.93	32.76
GSMUA_Achr1P20650_001	Banana	cytosol	24.95	14.95
GSMUA_Achr1P20470_001	Banana	nucleus	22.64	13.69
GSMUA_Achr6P36590_001	Banana	cytosol	21.8	12.79

Protein Annotations

EnsemblPlants:GSMUA_Achr4P23610_001	EnsemblPlants:GSMUA_Achr4T23610_001	EnsemblPlantsGene:GSMUA_Achr4G23610_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:EXS_C	InterPro:IPR004342	PANTHER:PTHR10783	PANTHER:PTHR10783:SF46	PFAM:PF03124	PFscan:PS51380
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002958BB9	UniProt:M0SRH2	MapMan:35.1	:

Description

EXS family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G23610_001]

Coordinates

chr4:-:23640906..23648265

Molecular Weight (calculated)

55791.3 Da

IEP (calculated)

8.504

GRAVY (calculated)

0.297

Length

477 amino acids

Sequence
(BLAST)

001: MYEVPLPSAT SPHLRRAGSK PIFTDQDSTE PGVANDLGLV FPTKVNEMKS PSVAASSVAM IPSPIFLWRF KVLLFLMWGI SCCKIGWDSV MQMNTDKRHL
101: FLYEAFLYFN PLLLVTLMVW LWGVNLWVFS QSSVNYAKVF DLDHTHLTYR EIWKCATWMT IIVPTSMAAY LYLYSHGEVS LAASQPVILY AAILMVLIFP
201: FEIFYLPSRY YLLRTVWRII LPLQASAITF SDFFLADIMT SMSKVFSDLE RSVCRMFNRQ VATIAWFEAD SVCGSHSVVI PVVLVFPYVC RFFQCLQQYK
301: DTKERTCLFN ALKYSTAVPV IFLSALKYHV LPLSWTNFYH PLWLISSVIN SLYSFYWDVT RDWDLSAFSR IFKFKNPHIC TNLFYGRIWV YYWVIGSNLI
401: LRCTWTYKLS AHLRHNHLTV FTITALEIMR RFQWIFFRVE NEWNKMMMMM SKPSLELSIN ETPEEEDRLL GSANHNV

Best Arabidopsis Sequence Match ( AT5G35730.1 )
(BLAST)

001: MFENPASNSP HLRKSSSKSV FIDPGLNGHL GEMGDLKGSN SPLHITTMVP SPIFLWRFKV VLFLFWALCC CKIGWDSVMR MSIDLRDLFL YEAFLYYNPL
101: LLVTMMVWLW GVNLWVFSQG SVNYSKVFDL DHNHLTHREM WKCSMWMTII VPTSMTAYLY LYSHGEVSLA ASQPVLLYIA FALVLIFPFD IFYLSSRYFL
201: LRTLWRIAFP LQPITFPDFF LADILTSMVK VFSDLERSVC RMVHRQVATI AWFEADAVCG SHQIAIPLVL VFPYICRLLQ CLRQYKDTKE KSSLLNALKY
301: STAVPVIFLS ALKYHVMPES WTSFYRPLWL FSSVINSLYS FYWDVTRDWD LSGFTKIFKF SRPSTISNLL YGRQWVYFWV IGSNLVLRCA WTYKLSAHLR
401: HNYITVFTMT AMEMLRRFQW VFFRVENEWN KITKSHPMGE ISLEEDKLLG STTPHDV

Arabidopsis Description

EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:Q8VYS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.