Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84739 | Canola | plasma membrane, plastid | 88.77 | 88.58 |
| Bra022884.1-P | Field mustard | plasma membrane | 86.18 | 88.47 |
| CDY65458 | Canola | plasma membrane, plastid | 88.77 | 88.39 |
| CDX84740 | Canola | plasma membrane | 54.86 | 81.94 |
| CDY71691 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.89 | 77.94 |
| CDY58360 | Canola | endoplasmic reticulum, plasma membrane | 23.54 | 75.17 |
| CDX98567 | Canola | golgi, nucleus, plasma membrane | 32.83 | 74.51 |
| KRH26830 | Soybean | endoplasmic reticulum, golgi | 34.13 | 68.7 |
| CDX76897 | Canola | mitochondrion | 17.49 | 67.5 |
| KRH30768 | Soybean | golgi, plasma membrane | 30.45 | 64.68 |
| VIT_12s0059g02490.t01 | Wine grape | plastid | 64.36 | 63.14 |
| Os12t0595000-01 | Rice | plasma membrane | 56.59 | 62.09 |
| TraesCS5A01G062900.1 | Wheat | plasma membrane | 56.59 | 61.79 |
| EES17313 | Sorghum | plasma membrane | 56.16 | 61.61 |
| TraesCS5B01G070200.1 | Wheat | plasma membrane | 56.37 | 61.56 |
| TraesCS5D01G074100.1 | Wheat | plasma membrane | 56.37 | 61.56 |
| KRH22527 | Soybean | plasma membrane | 62.42 | 61.36 |
| Solyc04g080050.2.1 | Tomato | golgi, peroxisome, plasma membrane, plastid | 62.42 | 61.1 |
| TraesCS7D01G365900.3 | Wheat | plasma membrane | 56.8 | 60.74 |
| AT5G35730.1 | Thale cress | plastid | 59.61 | 60.39 |
| TraesCS7A01G356800.1 | Wheat | plasma membrane | 56.37 | 60.28 |
| TraesCS7B01G271100.2 | Wheat | plasma membrane | 56.16 | 60.05 |
| Solyc07g022830.2.1 | Tomato | golgi, plasma membrane, plastid | 58.96 | 59.22 |
| OQU79488 | Sorghum | golgi, plasma membrane | 27.86 | 59.17 |
| GSMUA_Achr7P00360_001 | Banana | plasma membrane | 60.48 | 58.95 |
| GSMUA_Achr4P23610_001 | Banana | plasma membrane | 59.18 | 57.44 |
| Zm00001d041383_P002 | Maize | plasma membrane | 56.16 | 57.27 |
| Zm00001d030939_P004 | Maize | plasma membrane | 55.94 | 57.05 |
| PGSC0003DMT400080869 | Potato | golgi, peroxisome, plasma membrane | 54.0 | 55.31 |
| KRH26831 | Soybean | plasma membrane | 26.78 | 55.11 |
| PGSC0003DMT400071614 | Potato | golgi, plasma membrane, plastid | 32.4 | 54.74 |
| HORVU5Hr1G016790.15 | Barley | peroxisome, plastid | 56.59 | 52.19 |
| CDX82438 | Canola | cytosol | 22.46 | 51.49 |
| CDX81844 | Canola | cytosol | 19.22 | 49.44 |
| CDY22918 | Canola | cytosol | 22.68 | 45.26 |
| Bra012265.1-P | Field mustard | cytosol | 20.09 | 43.66 |
| AT1G26730.1 | Thale cress | cytosol | 25.49 | 15.73 |
| AT1G35350.1 | Thale cress | cytosol | 23.97 | 14.78 |
| AT4G25350.1 | Thale cress | cytosol | 23.54 | 14.63 |
| AT1G68740.1 | Thale cress | cytosol | 24.62 | 14.54 |
| AT3G29060.1 | Thale cress | cytosol, nucleus, plasma membrane | 23.97 | 13.88 |
| AT1G69480.2 | Thale cress | cytosol | 23.11 | 13.77 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 22.46 | 13.3 |
| AT1G14040.1 | Thale cress | cytosol | 23.11 | 13.16 |
| AT2G03250.1 | Thale cress | cytosol | 19.44 | 12.52 |
| AT2G03260.1 | Thale cress | cytosol, peroxisome, plasma membrane | 21.81 | 12.52 |
| AT2G03240.1 | Thale cress | cytosol, nucleus, plasma membrane | 22.03 | 12.39 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817790 | ProteinID:AEC08664.1 | ProteinID:ANM62262.1 | ArrayExpress:AT2G32295 | EnsemblPlantsGene:AT2G32295 |
| RefSeq:AT2G32295 | TAIR:AT2G32295 | RefSeq:AT2G32295-TAIR-G | EnsemblPlants:AT2G32295.2 | InterPro:EXS_C | UniProt:F4ISV2 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR004342 | RefSeq:NP_001318333.1 | RefSeq:NP_850188.5 | PFAM:PF03124 | PFscan:PS51380 |
| PANTHER:PTHR10783 | PANTHER:PTHR10783:SF46 | TMHMM:TMhelix | UniParc:UPI0001E92C78 | : | : |
Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
Coordinates
chr2:+:13718845..13722223
Molecular Weight (calculated)
54056.1 Da
IEP (calculated)
9.576
GRAVY (calculated)
0.300
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.