Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84739 | Canola | plasma membrane, plastid | 98.92 | 99.14 |
| AT2G32295.2 | Thale cress | plasma membrane | 88.39 | 88.77 |
| CDX84740 | Canola | plasma membrane | 58.71 | 88.06 |
| CDX98567 | Canola | golgi, nucleus, plasma membrane | 37.42 | 85.29 |
| CDY71691 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 24.52 | 83.82 |
| CDY58360 | Canola | endoplasmic reticulum, plasma membrane | 25.59 | 82.07 |
| CDX76897 | Canola | mitochondrion | 19.35 | 75.0 |
| KRH26830 | Soybean | endoplasmic reticulum, golgi | 33.33 | 67.39 |
| KRH30768 | Soybean | golgi, plasma membrane | 29.89 | 63.76 |
| VIT_12s0059g02490.t01 | Wine grape | plastid | 63.23 | 62.29 |
| CDX74638 | Canola | golgi, plasma membrane, plastid | 60.0 | 61.18 |
| Solyc04g080050.2.1 | Tomato | golgi, peroxisome, plasma membrane, plastid | 61.72 | 60.68 |
| Os12t0595000-01 | Rice | plasma membrane | 54.84 | 60.43 |
| CDY33680 | Canola | golgi, plasma membrane, plastid | 59.78 | 60.3 |
| KRH22527 | Soybean | plasma membrane | 61.08 | 60.3 |
| TraesCS5D01G074100.1 | Wheat | plasma membrane | 54.62 | 59.91 |
| TraesCS5A01G062900.1 | Wheat | plasma membrane | 54.62 | 59.91 |
| TraesCS5B01G070200.1 | Wheat | plasma membrane | 54.62 | 59.91 |
| EES17313 | Sorghum | plasma membrane | 53.98 | 59.48 |
| TraesCS7D01G365900.3 | Wheat | plasma membrane | 54.84 | 58.89 |
| Solyc07g022830.2.1 | Tomato | golgi, plasma membrane, plastid | 58.28 | 58.79 |
| TraesCS7A01G356800.1 | Wheat | plasma membrane | 54.41 | 58.43 |
| TraesCS7B01G271100.2 | Wheat | plasma membrane | 54.19 | 58.2 |
| CDX82438 | Canola | cytosol | 25.16 | 57.92 |
| GSMUA_Achr7P00360_001 | Banana | plasma membrane | 58.92 | 57.68 |
| OQU79488 | Sorghum | golgi, plasma membrane | 26.45 | 56.42 |
| GSMUA_Achr4P23610_001 | Banana | plasma membrane | 57.63 | 56.18 |
| Zm00001d030939_P004 | Maize | plasma membrane | 54.19 | 55.51 |
| PGSC0003DMT400071614 | Potato | golgi, plasma membrane, plastid | 32.69 | 55.47 |
| Zm00001d041383_P002 | Maize | plasma membrane | 53.98 | 55.29 |
| KRH26831 | Soybean | plasma membrane | 26.45 | 54.67 |
| CDX81844 | Canola | cytosol | 21.08 | 54.44 |
| PGSC0003DMT400080869 | Potato | golgi, peroxisome, plasma membrane | 52.9 | 54.42 |
| HORVU5Hr1G016790.15 | Barley | peroxisome, plastid | 54.84 | 50.8 |
| CDY22918 | Canola | cytosol | 25.16 | 50.43 |
| CDY71475 | Canola | extracellular, golgi, plasma membrane | 15.7 | 27.04 |
| CDY44990 | Canola | extracellular, golgi | 4.3 | 25.97 |
| CDY39346 | Canola | plasma membrane | 19.78 | 22.6 |
| CDY45173 | Canola | cytosol, golgi, peroxisome | 8.17 | 21.35 |
| CDY72508 | Canola | golgi, peroxisome | 19.35 | 20.18 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 22.8 | 18.79 |
| CDY04251 | Canola | endoplasmic reticulum, mitochondrion | 3.23 | 17.65 |
| CDY56003 | Canola | plasma membrane | 20.65 | 16.3 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 20.65 | 16.05 |
| CDY04052 | Canola | nucleus | 22.37 | 16.02 |
| CDX92696 | Canola | cytosol, peroxisome, plasma membrane | 22.37 | 14.33 |
| CDX82870 | Canola | cytosol | 23.01 | 14.32 |
| CDY46445 | Canola | cytosol | 22.8 | 14.17 |
| CDY18123 | Canola | cytosol | 23.23 | 14.15 |
| CDY16184 | Canola | cytosol | 22.37 | 14.05 |
| CDY58396 | Canola | cytosol | 22.15 | 13.96 |
| CDY08975 | Canola | cytosol, peroxisome, plasma membrane | 21.72 | 13.84 |
| CDY52351 | Canola | cytosol, peroxisome, plasma membrane | 21.29 | 13.79 |
| CDY65467 | Canola | cytosol | 22.8 | 13.73 |
| CDY44412 | Canola | cytosol, nucleus, plasma membrane | 23.23 | 13.72 |
| CDY54499 | Canola | cytosol | 22.58 | 13.64 |
| CDY38614 | Canola | cytosol | 22.58 | 13.64 |
| CDX95992 | Canola | cytosol | 22.58 | 13.64 |
| CDY33781 | Canola | cytosol | 22.15 | 13.62 |
| CDY16129 | Canola | cytosol | 22.15 | 13.52 |
| CDX81539 | Canola | cytosol | 22.37 | 13.51 |
| CDX77515 | Canola | cytosol | 23.44 | 13.42 |
| CDY04252 | Canola | cytosol | 22.15 | 13.36 |
| CDY07366 | Canola | cytosol | 22.8 | 13.28 |
| CDY64495 | Canola | cytosol | 22.37 | 13.28 |
| CDY19999 | Canola | cytosol, nucleus, plasma membrane | 22.58 | 13.16 |
| CDY56000 | Canola | cytosol | 20.86 | 13.07 |
| CDY00103 | Canola | nucleus, peroxisome, plasma membrane | 21.94 | 12.78 |
| CDY03008 | Canola | cytosol, peroxisome, plasma membrane | 20.86 | 12.76 |
| CDX95933 | Canola | cytosol | 20.86 | 12.37 |
| CDX98143 | Canola | cytosol | 21.08 | 12.34 |
| CDY04142 | Canola | cytosol, nucleus, plasma membrane | 21.29 | 12.27 |
| CDY40927 | Canola | cytosol | 20.65 | 12.26 |
| CDY03007 | Canola | cytosol | 20.86 | 12.16 |
| CDY45174 | Canola | cytosol, peroxisome, plasma membrane | 20.86 | 12.12 |
| CDY04143 | Canola | cytosol | 20.86 | 12.03 |
| CDY16128 | Canola | cytosol | 20.0 | 11.92 |
| CDY36429 | Canola | cytosol, peroxisome, plasma membrane | 21.08 | 11.88 |
| CDY37178 | Canola | cytosol | 20.65 | 11.75 |
| CDY09339 | Canola | cytosol | 20.43 | 11.63 |
| CDY45175 | Canola | cytosol, nucleus, plasma membrane | 19.14 | 11.47 |
| CDY03011 | Canola | cytosol, nucleus, plasma membrane | 19.14 | 11.41 |
| CDY45171 | Canola | cytosol, peroxisome, plasma membrane | 13.12 | 9.61 |
| CDY33783 | Canola | cytosol, peroxisome, plasma membrane | 7.1 | 5.9 |
| CDY60937 | Canola | cytosol, nucleus, plasma membrane | 21.08 | 5.82 |
| CDY09013 | Canola | nucleus | 1.94 | 4.55 |
| CDY36431 | Canola | cytosol | 1.94 | 4.11 |
| CDY56002 | Canola | cytosol | 2.8 | 3.98 |
| CDY52794 | Canola | nucleus | 0.86 | 1.41 |
Protein Annotations
| EnsemblPlants:CDY65458 | EnsemblPlantsGene:GSBRNA2T00046635001 | GO:A0A078JCV0 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EXS_C | InterPro:IPR004342 | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF46 | PFAM:PF03124 | PFscan:PS51380 |
| ProteinID:CDY65458 | ProteinID:CDY65458.1 | TMHMM:TMhelix | UniParc:UPI0004EDB184 | UniProt:A0A078JCV0 | MapMan:35.1 |
Description
BnaC03g71960DBnaC03g71960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCV0]
Coordinates
chrLK034796:-:12158..15194
Molecular Weight (calculated)
54095.1 Da
IEP (calculated)
9.551
GRAVY (calculated)
0.296
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGGVFSVPV NNPHLRKSGS RLIIANLEGE NDLKNSSMQL GTIAKLRSPL ILSSLKVALY VGGLYVCGKI GWESVMKMGL DTRELFFYET FLYYNPLLLI
101: TMMVWLWGVN LWVFSRTGVD YAAIFYLGPD HLSHKEIWKC ARWMTTIILT SMTAYLYLYS HGDVSLAASQ PIVLYLSAVI ILIIPFDIFY MSSRYYLLWT
201: FWRILFPVKT VSFSDFFLAD ILTSLSKVLS DLERSVCRMV HRQVATVAWF EADSVCGSHS AVIPLVLVLP YLFRLFQCIR QYKDSKDIAN IWNAGKYLTA
301: VPVIFLSALK YFIDQDTWTY SIQPAWILSG LANTFFSFFW DVLRDWDLSV FTRIFKFTKP NLCSHLLYGR RWVYVWVIGS NLVLRWTWTY KLSAHLRNNY
401: ITVFIITLLE IYRRFQWAFF RIENVWYKIN NPKRTTSHQT NPVSLQNDNG GEQEKLLAHS HSLGV
101: TMMVWLWGVN LWVFSRTGVD YAAIFYLGPD HLSHKEIWKC ARWMTTIILT SMTAYLYLYS HGDVSLAASQ PIVLYLSAVI ILIIPFDIFY MSSRYYLLWT
201: FWRILFPVKT VSFSDFFLAD ILTSLSKVLS DLERSVCRMV HRQVATVAWF EADSVCGSHS AVIPLVLVLP YLFRLFQCIR QYKDSKDIAN IWNAGKYLTA
301: VPVIFLSALK YFIDQDTWTY SIQPAWILSG LANTFFSFFW DVLRDWDLSV FTRIFKFTKP NLCSHLLYGR RWVYVWVIGS NLVLRWTWTY KLSAHLRNNY
401: ITVFIITLLE IYRRFQWAFF RIENVWYKIN NPKRTTSHQT NPVSLQNDNG GEQEKLLAHS HSLGV
001: MFGGVLSMPV NNPHLRKSGS RHIVTNLGDN DLKTASMLLS TYAKLQTPIF LRSLKVALYI GGLYVCGKVG LESVMKMGVE TRELFFYETF LYYNPLLLIT
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
101: LMVWLWGVNL WVFSRSGVDY AAIFYLGSDH LSHREIWKCA RWMTIIILTS MTAYLYLYSH GDVKLAASQP VVLYFSAVII LIIPFNIFYM SSRYYLLWTF
201: WRILFPVHAV TFSDFFLADI LTSMSKVLSD LERSVCRMVH RQVATVAWFE ADSVCGSHSA AIPLVLVLPY LFRLFQCIRQ YKDSKDIANI YNAGKYLTAV
301: PVIFLSALKY YIDPDTWTYS IQPAWILSGL ANTFFSFFWD ILRDWDLSVF TRIFKFTRPN LFSHLLYGRR WVYVWVIGSN LVLRWTWTYK LSAHLRNNYI
401: TVFIITALEI YRRFQWAFFR IENVWYKINN PKHTAHQSNP LSLQHDIDSE HEKLLAHSHS PGV
Arabidopsis Description
EXS (ERD1/XPR1/SYG1) family protein [Source:UniProtKB/TrEMBL;Acc:F4ISV2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.