Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23430.1 | CDY37693 | AT2G33770.1 | 22634761 |
| AT3G23430.1 | CDY53783 | AT2G33770.1 | 22634761 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18123 | Canola | cytosol | 97.47 | 25.29 |
| CDY52794 | Canola | nucleus | 34.85 | 24.3 |
| Bra023727.1-P | Field mustard | cytosol | 95.96 | 24.23 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 85.86 | 21.74 |
| CDX77515 | Canola | cytosol | 87.37 | 21.31 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 58.08 | 20.39 |
| CDY36431 | Canola | cytosol | 20.2 | 18.26 |
| Solyc09g090360.2.1 | Tomato | cytosol | 58.59 | 14.72 |
| PGSC0003DMT400044207 | Potato | cytosol, nucleus, plasma membrane | 58.08 | 14.56 |
| KRH34432 | Soybean | cytosol | 55.05 | 14.08 |
| KRH31683 | Soybean | cytosol, nucleus, plasma membrane | 54.04 | 14.01 |
| KRG92358 | Soybean | cytosol | 54.04 | 13.82 |
| VIT_05s0049g01410.t01 | Wine grape | cytosol | 55.56 | 13.8 |
| CDY56002 | Canola | cytosol | 22.73 | 13.76 |
| KRH69098 | Soybean | cytosol | 52.53 | 13.63 |
| GSMUA_Achr1P20470_001 | Banana | nucleus | 40.91 | 10.27 |
| HORVU6Hr1G089130.9 | Barley | cytosol | 38.38 | 9.39 |
| HORVU6Hr1G089190.23 | Barley | cytosol | 38.38 | 9.39 |
| TraesCS6D01G364100.1 | Wheat | cytosol | 36.87 | 9.24 |
| TraesCS6B01G418600.1 | Wheat | cytosol, nucleus, plasma membrane | 36.87 | 9.15 |
| TraesCS6D01G364300.1 | Wheat | cytosol | 35.86 | 9.1 |
| CDX81539 | Canola | cytosol | 35.35 | 9.09 |
| CDY54499 | Canola | cytosol | 34.85 | 8.96 |
| CDY33783 | Canola | cytosol, peroxisome, plasma membrane | 25.25 | 8.94 |
| TraesCS6A01G379700.1 | Wheat | cytosol | 35.86 | 8.89 |
| TraesCS6A01G380000.1 | Wheat | cytosol | 35.86 | 8.89 |
| TraesCS6D01G364600.1 | Wheat | plastid | 35.86 | 8.88 |
| CDX95992 | Canola | cytosol | 34.34 | 8.83 |
| CDY38614 | Canola | cytosol | 34.34 | 8.83 |
| TraesCS6B01G418100.2 | Wheat | cytosol, peroxisome, plasma membrane | 35.86 | 8.71 |
| Os02t0809800-01 | Rice | cytosol | 35.86 | 8.71 |
| TraesCS6B01G418000.1 | Wheat | cytosol | 34.34 | 8.71 |
| CDY04252 | Canola | cytosol | 33.33 | 8.56 |
| EES07731 | Sorghum | cytosol, nucleus, plasma membrane | 34.85 | 8.5 |
| CDY07366 | Canola | cytosol | 33.84 | 8.4 |
| GSMUA_Achr6P36590_001 | Banana | cytosol | 34.34 | 8.36 |
| Zm00001d018445_P004 | Maize | cytosol, nucleus, plasma membrane | 32.83 | 8.07 |
| CDY45171 | Canola | cytosol, peroxisome, plasma membrane | 24.75 | 7.72 |
| CDY16184 | Canola | cytosol | 26.26 | 7.03 |
| CDY58396 | Canola | cytosol | 25.25 | 6.78 |
| CDY03011 | Canola | cytosol, nucleus, plasma membrane | 25.76 | 6.54 |
| CDY16128 | Canola | cytosol | 25.25 | 6.41 |
| CDY03008 | Canola | cytosol, peroxisome, plasma membrane | 24.24 | 6.32 |
| CDY03007 | Canola | cytosol | 25.25 | 6.27 |
| CDY45175 | Canola | cytosol, nucleus, plasma membrane | 24.24 | 6.19 |
| CDY46445 | Canola | cytosol | 23.23 | 6.15 |
| CDX92696 | Canola | cytosol, peroxisome, plasma membrane | 22.22 | 6.06 |
| CDX98143 | Canola | cytosol | 24.24 | 6.05 |
| CDY19999 | Canola | cytosol, nucleus, plasma membrane | 24.24 | 6.02 |
| CDY45174 | Canola | cytosol, peroxisome, plasma membrane | 24.24 | 6.0 |
| CDY04143 | Canola | cytosol | 24.24 | 5.96 |
| CDY36429 | Canola | cytosol, peroxisome, plasma membrane | 24.75 | 5.94 |
| CDY00103 | Canola | nucleus, peroxisome, plasma membrane | 23.74 | 5.89 |
| CDY04142 | Canola | cytosol, nucleus, plasma membrane | 23.74 | 5.82 |
| CDY56000 | Canola | cytosol | 21.72 | 5.8 |
| CDX82870 | Canola | cytosol | 21.72 | 5.76 |
| CDY37178 | Canola | cytosol | 23.74 | 5.75 |
| CDY09339 | Canola | cytosol | 23.74 | 5.75 |
| CDY64495 | Canola | cytosol | 22.73 | 5.75 |
| CDX95933 | Canola | cytosol | 22.73 | 5.74 |
| CDY33781 | Canola | cytosol | 21.72 | 5.69 |
| CDY16129 | Canola | cytosol | 21.72 | 5.64 |
| CDY40927 | Canola | cytosol | 22.22 | 5.62 |
| CDY44412 | Canola | cytosol, nucleus, plasma membrane | 22.22 | 5.59 |
| CDY65467 | Canola | cytosol | 21.72 | 5.57 |
| CDY08975 | Canola | cytosol, peroxisome, plasma membrane | 19.7 | 5.34 |
| CDY52351 | Canola | cytosol, peroxisome, plasma membrane | 18.69 | 5.15 |
| CDX98567 | Canola | golgi, nucleus, plasma membrane | 4.04 | 3.92 |
| CDY04052 | Canola | nucleus | 10.61 | 3.24 |
| CDY60937 | Canola | cytosol, nucleus, plasma membrane | 23.23 | 2.73 |
| CDX81844 | Canola | cytosol | 2.02 | 2.22 |
| CDX82438 | Canola | cytosol | 2.02 | 1.98 |
| CDY65458 | Canola | plasma membrane, plastid | 4.55 | 1.94 |
| CDX74638 | Canola | golgi, plasma membrane, plastid | 4.04 | 1.75 |
| CDY33680 | Canola | golgi, plasma membrane, plastid | 4.04 | 1.74 |
| CDX84739 | Canola | plasma membrane, plastid | 4.04 | 1.72 |
| KRH07887 | Soybean | extracellular, golgi, mitochondrion, plasma membrane | 1.01 | 1.71 |
| CDY22918 | Canola | cytosol | 1.52 | 1.29 |
| CDY56003 | Canola | plasma membrane | 3.54 | 1.19 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 2.53 | 0.84 |
| KRH72033 | Soybean | cytosol, extracellular, golgi | 0.51 | 0.8 |
| CDX84740 | Canola | plasma membrane | 1.01 | 0.65 |
| Zm00001d051945_P001 | Maize | peroxisome, plasma membrane, plastid | 0.51 | 0.18 |
| CDY72508 | Canola | golgi, peroxisome | 0.0 | 0.0 |
| CDY71691 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
| CDY71475 | Canola | extracellular, golgi, plasma membrane | 0.0 | 0.0 |
| CDY58360 | Canola | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| TraesCS6D01G364200.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| CDY45173 | Canola | cytosol, golgi, peroxisome | 0.0 | 0.0 |
| CDY44990 | Canola | extracellular, golgi | 0.0 | 0.0 |
| CDY39346 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY04251 | Canola | endoplasmic reticulum, mitochondrion | 0.0 | 0.0 |
| CDX76897 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY09013 | EnsemblPlantsGene:GSBRNA2T00001128001 | InterPro:IPR004331 | InterPro:SPX_dom | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF82 |
| PFAM:PF03105 | PFscan:PS51382 | ProteinID:CDY09013 | ProteinID:CDY09013.1 | SEG:seg | UniParc:UPI0004EE1E35 |
| UniProt:A0A078FB19 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g30780DBnaC01g30780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB19]
Coordinates
chrLK031991:-:608954..611841
Molecular Weight (calculated)
22937.2 Da
IEP (calculated)
9.338
GRAVY (calculated)
-0.782
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKFSKELEA QLIPEWKEAF VNYCQLKKQV KKIKISRKPK PASLYPIPHD PDFGRSLFDP VRKLARTFSD KLFSSSEKPE IIQVRRRKSS EDGDGVEEIY
101: QTELVQLFSE EDEVKVFFAK LDEELNKVNQ FHKSKETEFV GRGEILKKQL DILAELKQIL SDRKKRSLSG SNSQRSFSSS ARNSDFSAEN DIKESEIT
101: QTELVQLFSE EDEVKVFFAK LDEELNKVNQ FHKSKETEFV GRGEILKKQL DILAELKQIL SDRKKRSLSG SNSQRSFSSS ARNSDFSAEN DIKESEIT
001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG
Arabidopsis Description
PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.