Factsheet for PGSC0003DMT400044207

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400076435

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	PGSC0003DMT400076435	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090360.2.1	Tomato	cytosol	97.09	97.33
VIT_05s0049g01410.t01	Wine grape	cytosol	74.43	73.78
CDY09011	Canola	cytosol, peroxisome, plasma membrane	54.18	71.57
KRH34432	Soybean	cytosol	69.24	70.67
KRG92358	Soybean	cytosol	68.35	69.77
KRH31683	Soybean	cytosol, nucleus, plasma membrane	67.09	69.37
Bra023727.1-P	Field mustard	cytosol	68.73	69.26
KRH69098	Soybean	cytosol	66.46	68.81
KRH72033	Soybean	cytosol, extracellular, golgi	10.89	68.8
Bra014948.1-P	Field mustard	cytosol	67.72	68.24
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	67.22	67.9
CDX85098	Canola	cytosol, peroxisome, plasma membrane	46.96	65.78
CDX77515	Canola	cytosol	67.59	65.76
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	8.99	60.68
TraesCS6D01G364200.1	Wheat	mitochondrion	37.34	60.45
GSMUA_Achr1P20470_001	Banana	nucleus	58.86	58.94
CDY09013	Canola	nucleus	14.56	58.08
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	40.51	57.87
CDY18123	Canola	cytosol	54.81	56.75
GSMUA_Achr6P36590_001	Banana	cytosol	57.47	55.84
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	53.29	52.76
TraesCS6D01G364100.1	Wheat	cytosol	52.41	52.41
Os02t0809800-01	Rice	cytosol	54.05	52.39
TraesCS6D01G364600.1	Wheat	plastid	53.04	52.38
TraesCS6A01G380000.1	Wheat	cytosol	52.78	52.19
HORVU6Hr1G089190.23	Barley	cytosol	53.29	52.04
TraesCS6A01G379700.1	Wheat	cytosol	52.53	51.94
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	52.91	51.93
HORVU6Hr1G089130.9	Barley	cytosol	52.91	51.67
TraesCS6D01G364300.1	Wheat	cytosol	50.76	51.41
TraesCS6B01G418000.1	Wheat	cytosol	50.76	51.34
EES07731	Sorghum	cytosol, nucleus, plasma membrane	52.28	50.86
TraesCS6B01G418100.2	Wheat	cytosol, peroxisome, plasma membrane	51.65	50.06
PGSC0003DMT400064691	Potato	cytosol, nucleus, plasma membrane	34.56	40.93
PGSC0003DMT400003629	Potato	cytosol	30.38	31.33
PGSC0003DMT400073008	Potato	cytosol	30.63	31.03
PGSC0003DMT400091701	Potato	cytosol	27.59	29.78
PGSC0003DMT400071614	Potato	golgi, plasma membrane, plastid	8.86	25.55
PGSC0003DMT400080869	Potato	golgi, peroxisome, plasma membrane	12.78	22.35

Protein Annotations

EntrezGene:102581109	MapMan:24.2.7.4	MapMan:25.3.2.2	ncoils:Coil	InterPro:EXS_C	GO:GO:0000822
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005802	GO:GO:0005886	GO:GO:0006799	GO:GO:0006810
GO:GO:0006817	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0015114	GO:GO:0016020
GO:GO:0016021	GO:GO:0016036	GO:GO:0035435	GO:GO:0048016	InterPro:IPR004331	InterPro:IPR004342
UniProt:M1BFS9	PFAM:PF03105	PFAM:PF03124	EnsemblPlantsGene:PGSC0003DMG400017163	PGSC:PGSC0003DMG400017163	EnsemblPlants:PGSC0003DMT400044207
InterPro:PHO1_SPX	PFscan:PS51380	PFscan:PS51382	PANTHER:PTHR10783	PANTHER:PTHR10783:SF80	InterPro:SPX_dom
TMHMM:TMhelix	UniParc:UPI000294D06E	RefSeq:XP_006354462.1	SEG:seg	:	:

Description

Xenotropic and polytropic murine leukemia virus receptor pho1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017163]

Coordinates

chr9:-:56661754..56671464

Molecular Weight (calculated)

90925.2 Da

IEP (calculated)

9.527

GRAVY (calculated)

-0.126

Length

790 amino acids

Sequence
(BLAST)

001: MVKFSKELEA QLIPEWKDAF VNYWQLKKQV KKIKISKKPH HVHDGNSSLI HDFGRSIFDS IRSFTITSNM KFHKSHEVSQ VKSIIKEGEN GEEQEEQEEI
101: YETENELVQL FSEEDEVRLF FEMLDEELKK VNEFYKTKES EFLERGDILN KQLQILLDLK QVLSDRRRKT LGSRSGSGFF SRSHSSSGRN SDFSETQSDC
201: GSPTGTETIS QTEEVIAALE KNGINFVNSA STRAKTKKGG KPKVAMRIDI PATTPTRTIA AVTSMLWEDL VNNPKKDGPR EYINKKKIQC AEKMIRGAFV
301: ELYRGLGLLK TYSSLNMVAF VKILKKFDKV AKQQSSANYL KQVKRSHFIS SDKVVRLMDE VESLFTQHFA NSDRKKAMKF LRPQQNKESH MVTFFVGLFT
401: GCFVTLFSVY AILAHLSGMF STRTEAAYVE TVYPVFSMFA LLSLHLFMYG CNLFLWKGTR INYNFIFEFQ PKTALKYRDA FLIGTCLMTS VVGALVVHLI
501: LLSNGFSPSQ VDAIPGILLL IFLALLICPL NVFYRPTRFY FLKVIRNIVC SPFYKVLMVD FFMADQLTSQ IPLMRHLESS ACYFLAGSLT THGLPTCKSG
601: RMYRELAYVI SFAPYYWRAM QCARRWFDES DINHLANLGK YVSAMVAAGA RLTYGREPDS QLWFSIVLVT SVIATVYQLY WDFVKDWGFF NLKSKNFLLR
701: DELILKNKSI YYASIALNLV LRVAWVETVM HFNVGPFESH LLDFFLASLE VIRRGHWNFY RLENEHLNNV GKFRAVKTVP LPFRETDSDG

Best Arabidopsis Sequence Match ( AT3G23430.1 )
(BLAST)

001: MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI
101: YQTELVQLFS EEDEVKVFFA RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS SVRNSDFSAG SPGELSEIQS
201: ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG
301: LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF
401: VIYIILAHLS GIFTSSDQVS YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF MTSVVAAMVI HLILRASGFS
501: ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA
601: YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK
701: NFYYLSIALN LVLRVAWIET IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS DG

Arabidopsis Description

PHO1Phosphate transporter PHO1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S403]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.