Factsheet for TraesCS6B01G418100.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G388400.1
TraesCS1B01G415800.1
TraesCS1D01G396300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	TraesCS1A01G388400.1	AT2G33770.1	22634761
AT3G23430.1	TraesCS1B01G415800.1	AT2G33770.1	22634761
AT3G23430.1	TraesCS1D01G396300.1	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G364300.1	Wheat	cytosol	90.92	95.0
TraesCS6B01G418000.1	Wheat	cytosol	84.54	88.22
TraesCS6B01G418600.1	Wheat	cytosol, nucleus, plasma membrane	85.15	86.97
HORVU6Hr1G089190.23	Barley	cytosol	84.91	85.54
HORVU6Hr1G089130.9	Barley	cytosol	84.17	84.8
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	51.29	75.59
Os02t0809800-01	Rice	cytosol	75.21	75.21
EES07731	Sorghum	cytosol, nucleus, plasma membrane	72.27	72.54
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	71.04	71.93
GSMUA_Achr1P20470_001	Banana	nucleus	56.32	58.17
CDY09011	Canola	cytosol, peroxisome, plasma membrane	41.6	56.69
GSMUA_Achr6P36590_001	Banana	cytosol	53.74	53.87
KRH72033	Soybean	cytosol, extracellular, golgi	8.22	53.6
VIT_05s0049g01410.t01	Wine grape	cytosol	51.29	52.45
Bra023727.1-P	Field mustard	cytosol	50.43	52.42
CDX85098	Canola	cytosol, peroxisome, plasma membrane	36.07	52.13
Bra014948.1-P	Field mustard	cytosol	49.94	51.91
KRH31683	Soybean	cytosol, nucleus, plasma membrane	48.59	51.83
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	50.06	51.65
Solyc09g090360.2.1	Tomato	cytosol	49.69	51.4
KRH34432	Soybean	cytosol	48.47	51.03
KRG92358	Soybean	cytosol	48.34	50.9
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	48.71	50.77
KRH69098	Soybean	cytosol	47.48	50.72
CDX77515	Canola	cytosol	49.82	50.0
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	6.75	47.01
CDY18123	Canola	cytosol	41.1	43.91
TraesCS7B01G129700.1	Wheat	cytosol, peroxisome, plasma membrane	40.98	41.23
CDY09013	Canola	nucleus	8.71	35.86
TraesCS5B01G070200.1	Wheat	plasma membrane	12.52	24.06
TraesCS7B01G271100.2	Wheat	plasma membrane	12.76	24.02

Protein Annotations

EnsemblPlants:TraesCS6B01G418100.2	EnsemblPlantsGene:TraesCS6B01G418100	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:EXS_C
InterPro:IPR004331	InterPro:IPR004342	InterPro:SPX_dom	ncoils:Coil	PANTHER:PTHR10783	PANTHER:PTHR10783:SF80
PFAM:PF03105	PFAM:PF03124	PFscan:PS51380	PFscan:PS51382	SEG:seg	TIGR:cd14447
TMHMM:TMhelix	MapMan:24.2.7.4	MapMan:25.3.2.2	:	:	:

Description

No Description!

Coordinates

chr6B:+:690447513..690451624

Molecular Weight (calculated)

91807.1 Da

IEP (calculated)

9.623

GRAVY (calculated)

-0.031

Length

815 amino acids

Sequence
(BLAST)

001: MVKFSREYEA SVIPEWKGAF VDYKGLKKLI KKIKLAQRDA DGSSSGDSSS EEAALAAGVE SVGYGGGFSV LDPVHALASR FSSVRAFTRQ AIRIDIVVRD
101: PSWLATCVHG TDHDVHFDMQ EDEESGDSGE LVPSTDKHER EFLEKADEEL EKVNTFYATK EAELLGRGEA VIDQLRILAD VKRILADHAA TRRARGTLSM
201: VAPSSPALSG SGLATQQSMS DGSAELQQAQ MTEGAAVADE VMAALERNGV SFVGLPAKKD AKKEGSGRGG RPSTVRIDIP ASNPGRAALK VWEELVNVLR
301: KDGASPAAAF VHRKKVQHAE KNIRDAFMAL YRGLELLKKF SSLNVKAFTK ILKKFVKVSG QQRATDLFSQ KVKGSSFNTS NKVLQLSDEV ESLFLKHFAG
401: NDKMVAMKYL NPKQPKSTHM VTFLVGLFTG TFVSLFIIYT ILAHASGIFA SVGDTAYHEV VYHVFSIFAL ISLHCFLYGC NLFMWKSTRI NQNFIFDFVP
501: NTALTHRDAF LMSAFIMCTV VTVLVINLFL INAGVPYTNA VPGALIVLSA GLLFCPFNVF YRSTRYCFMR IMRKIIFSPF YKVVMADFFM ADQLTSQIPL
601: LRHTEFAACY FMAGSFRAYP YETCTKNQQY KHLAYVISFL PYYWRAMQCL RRYLEEHDVN QLANAGKYVS AMVAAAVRLK YKATPTPFWV WMVLITSTGT
701: TVYQLYWDFV KDWGFFTPKS KNLWLRDDLI LKNKFTYYVS MMLNLVLRLS WTKSVMKISI TKNETRLLDF SRASLEIIRR GHWNFYRLEN EHLNNVGKFR
801: AVKTVPLPFH ELETD

Best Arabidopsis Sequence Match ( AT1G26730.1 )
(BLAST)

001: MKFGKDFVRQ MIPEWQQAYM DYAGLKSILQ EIQTSRKRSE RPGILKRKLS GSRNFSGLTK RYSRTASTRE PEIQDILVHA TTGDDGFERY ETTILEVAEA
101: GRESELAFFK TLDLEFDKVN HFYRSKVEEM VKEAVVLNKQ MDALIAFRIK VERPSSSWSC SETVSVDMNA LDSNDQRNTL AEEMGIRVEG NGSNGGDSTK
201: ESVPQVLSVL ERIRLNKTQE TPLSTIKNVL KLSNQEELKF TRENLKKIEE RLKNVFIEFY RKLRHLKNYS FLNTLAISKI MKKYDKIASR SAAKPYMEMV
301: DKSYLTSSDE INKLMLRVES TFVEHFAGLN RSKGMNLLRP KVKKEKHRIT FSTGFFVGCT VSLVVALVMF IHARNIMGAV GHKVYMETMF PLYSLFAFVV
401: LHMIMYASNI YFWKRYRVNY PFIFGFKEGT ELGYRHVLLL SFGLGTLALC AVLINLDMEM DPNTNDYKTM TELLPMFILA LVVAILFCPF NIFYRSSRVF
501: FLMVVFRCIA APLYKVNLPD FFLADQLTSQ VQALRSLEFY ICYYGWGDFK HRQNTCRSSD VYSTFYFIVA VIPYWSRFLQ CVRRLIEEND SSQGYNALKY
601: LLTVVAVCLR TAYSFNRGNI WKISAWVFSA LATFYGTYWD IVFDWGLLHR PSKHLLREKL LVPHKAVYYV AIVLNIVLRM AWLQTVLDFN LSFLHRETMI
701: ALLAALEIIR RGIWNFFRLE NEHLNNVGKF RAFKSVPLPF NYNEEEDRDS

Arabidopsis Description

PHO1-H7Phosphate transporter PHO1 homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.