Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G388400.1 | |
| TraesCS1B01G415800.1 | |
| TraesCS1D01G396300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G23430.1 | TraesCS1A01G388400.1 | AT2G33770.1 | 22634761 |
| AT3G23430.1 | TraesCS1B01G415800.1 | AT2G33770.1 | 22634761 |
| AT3G23430.1 | TraesCS1D01G396300.1 | AT2G33770.1 | 22634761 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G364200.1 | Wheat | mitochondrion | 59.15 | 94.67 |
| TraesCS6B01G418600.1 | Wheat | cytosol, nucleus, plasma membrane | 89.12 | 87.22 |
| HORVU6Hr1G089190.23 | Barley | cytosol | 89.37 | 86.28 |
| HORVU6Hr1G089130.9 | Barley | cytosol | 88.48 | 85.41 |
| TraesCS6B01G418100.2 | Wheat | cytosol, peroxisome, plasma membrane | 88.22 | 84.54 |
| Zm00001d051945_P001 | Maize | peroxisome, plasma membrane, plastid | 53.52 | 75.59 |
| Os02t0809800-01 | Rice | cytosol | 78.62 | 75.34 |
| EES07731 | Sorghum | cytosol, nucleus, plasma membrane | 76.18 | 73.28 |
| Zm00001d018445_P004 | Maize | cytosol, nucleus, plasma membrane | 74.26 | 72.05 |
| GSMUA_Achr1P20470_001 | Banana | nucleus | 57.87 | 57.29 |
| CDY09011 | Canola | cytosol, peroxisome, plasma membrane | 42.89 | 56.02 |
| KRH72033 | Soybean | cytosol, extracellular, golgi | 8.45 | 52.8 |
| GSMUA_Achr6P36590_001 | Banana | cytosol | 54.67 | 52.52 |
| VIT_05s0049g01410.t01 | Wine grape | cytosol | 53.01 | 51.94 |
| Bra023727.1-P | Field mustard | cytosol | 51.86 | 51.66 |
| Bra014948.1-P | Field mustard | cytosol | 51.34 | 51.15 |
| CDX85098 | Canola | cytosol, peroxisome, plasma membrane | 36.75 | 50.89 |
| KRH31683 | Soybean | cytosol, nucleus, plasma membrane | 49.68 | 50.79 |
| KRH34432 | Soybean | cytosol | 50.32 | 50.78 |
| KRG92358 | Soybean | cytosol | 50.32 | 50.78 |
| PGSC0003DMT400044207 | Potato | cytosol, nucleus, plasma membrane | 51.34 | 50.76 |
| Solyc09g090360.2.1 | Tomato | cytosol | 50.96 | 50.51 |
| AT3G23430.1 | Thale cress | cytosol, nucleus, plasma membrane | 50.19 | 50.13 |
| KRH69098 | Soybean | cytosol | 48.53 | 49.67 |
| CDX77515 | Canola | cytosol | 51.22 | 49.26 |
| KRH07887 | Soybean | extracellular, golgi, mitochondrion, plasma membrane | 6.79 | 45.3 |
| CDY18123 | Canola | cytosol | 42.0 | 42.99 |
| TraesCS7B01G129700.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.87 | 40.37 |
| CDY09013 | Canola | nucleus | 8.71 | 34.34 |
| TraesCS5B01G070200.1 | Wheat | plasma membrane | 13.19 | 24.29 |
| TraesCS7B01G271100.2 | Wheat | plasma membrane | 13.32 | 24.02 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G418000.1 | EnsemblPlantsGene:TraesCS6B01G418000 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:EXS_C |
| InterPro:IPR004331 | InterPro:IPR004342 | InterPro:SPX_dom | ncoils:Coil | PANTHER:PTHR10783 | PANTHER:PTHR10783:SF80 |
| PFAM:PF03105 | PFAM:PF03124 | PFscan:PS51380 | PFscan:PS51382 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.7.4 | MapMan:25.3.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:690437567..690443376
Molecular Weight (calculated)
87895.9 Da
IEP (calculated)
9.441
GRAVY (calculated)
0.027
Length
781 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKFSREYEA SVIPEWKGAF VDYKGLKKLI KKIKLARRDA DGSSAGDSSP ETAAGVESIG YDGGFSVLDP VRALTARLAP RVQVPAESGD SGELVPSTDK
101: HEREFLEKAD EELEKVNTFY AAQEAELLGR GEAVIDQLRI LADVKRILAD HAASRRARGT LPEVAPPSPA LSGSGRCLLS GPDTPQSMSD GSVELQQAHM
201: TEGAAVADEV MAALERNGVS FVGLPGKKDS KAGRLQLPST VRIDIPASNP GRAALKVWEE LVNLLRKDGA DPAAAFVLRK KVQHAEKNIR DAFMALYRGL
301: ELLKKFSPLN VKAFTKILKK FVKVSEQQRA TDLFSQKVKT SLFSTSDKVL QLSDEVESLF LKHFAGNDRM VAMKYLNPQQ HKSTHMITFL VGLFTGTFVS
401: LFIIYAILAH VSGIFASAGN TAYKELVYHV FSMFALISLH CFLYGCNLFI WKTTRINQNF IFDFVPNTAL THRDAFLMSA FIMCTIVTAL VINLFLINAG
501: VSYPNAVPGA LIVLLAGVLF CPFNVFYRST RYCFMRIMRN IIFSPFYKVL MADFFMADQL TSQVPLLRHM EFAACYFMAG SFRASPYETC TNSQHYKHMA
601: YVISFLPYYW GAMQCLRSYL EEHDVDQLAH AGKYMSAMVA AAVRFKYKAT PTPFWMCMVL ITSTGTTVYQ LYWDFVKDWG FFTPKSKNLW LRDDLILKNK
701: FTYYVSMMLN LVLRLSWTKS VMKIPINKNE TRLLDFFRAS LEIIRRGQWN FYRLENEHLN NVGKFGAVKT VPLPFQELET G
101: HEREFLEKAD EELEKVNTFY AAQEAELLGR GEAVIDQLRI LADVKRILAD HAASRRARGT LPEVAPPSPA LSGSGRCLLS GPDTPQSMSD GSVELQQAHM
201: TEGAAVADEV MAALERNGVS FVGLPGKKDS KAGRLQLPST VRIDIPASNP GRAALKVWEE LVNLLRKDGA DPAAAFVLRK KVQHAEKNIR DAFMALYRGL
301: ELLKKFSPLN VKAFTKILKK FVKVSEQQRA TDLFSQKVKT SLFSTSDKVL QLSDEVESLF LKHFAGNDRM VAMKYLNPQQ HKSTHMITFL VGLFTGTFVS
401: LFIIYAILAH VSGIFASAGN TAYKELVYHV FSMFALISLH CFLYGCNLFI WKTTRINQNF IFDFVPNTAL THRDAFLMSA FIMCTIVTAL VINLFLINAG
501: VSYPNAVPGA LIVLLAGVLF CPFNVFYRST RYCFMRIMRN IIFSPFYKVL MADFFMADQL TSQVPLLRHM EFAACYFMAG SFRASPYETC TNSQHYKHMA
601: YVISFLPYYW GAMQCLRSYL EEHDVDQLAH AGKYMSAMVA AAVRFKYKAT PTPFWMCMVL ITSTGTTVYQ LYWDFVKDWG FFTPKSKNLW LRDDLILKNK
701: FTYYVSMMLN LVLRLSWTKS VMKIPINKNE TRLLDFFRAS LEIIRRGQWN FYRLENEHLN NVGKFGAVKT VPLPFQELET G
001: MKFGKDFVRQ MIPEWQQAYM DYAGLKSILQ EIQTSRKRSE RPGILKRKLS GSRNFSGLTK RYSRTASTRE PEIQDILVHA TTGDDGFERY ETTILEVAEA
101: GRESELAFFK TLDLEFDKVN HFYRSKVEEM VKEAVVLNKQ MDALIAFRIK VERPSSSWSC SETVSVDMNA LDSNDQRNTL AEEMGIRVEG NGSNGGDSTK
201: ESVPQVLSVL ERIRLNKTQE TPLSTIKNVL KLSNQEELKF TRENLKKIEE RLKNVFIEFY RKLRHLKNYS FLNTLAISKI MKKYDKIASR SAAKPYMEMV
301: DKSYLTSSDE INKLMLRVES TFVEHFAGLN RSKGMNLLRP KVKKEKHRIT FSTGFFVGCT VSLVVALVMF IHARNIMGAV GHKVYMETMF PLYSLFAFVV
401: LHMIMYASNI YFWKRYRVNY PFIFGFKEGT ELGYRHVLLL SFGLGTLALC AVLINLDMEM DPNTNDYKTM TELLPMFILA LVVAILFCPF NIFYRSSRVF
501: FLMVVFRCIA APLYKVNLPD FFLADQLTSQ VQALRSLEFY ICYYGWGDFK HRQNTCRSSD VYSTFYFIVA VIPYWSRFLQ CVRRLIEEND SSQGYNALKY
601: LLTVVAVCLR TAYSFNRGNI WKISAWVFSA LATFYGTYWD IVFDWGLLHR PSKHLLREKL LVPHKAVYYV AIVLNIVLRM AWLQTVLDFN LSFLHRETMI
701: ALLAALEIIR RGIWNFFRLE NEHLNNVGKF RAFKSVPLPF NYNEEEDRDS
101: GRESELAFFK TLDLEFDKVN HFYRSKVEEM VKEAVVLNKQ MDALIAFRIK VERPSSSWSC SETVSVDMNA LDSNDQRNTL AEEMGIRVEG NGSNGGDSTK
201: ESVPQVLSVL ERIRLNKTQE TPLSTIKNVL KLSNQEELKF TRENLKKIEE RLKNVFIEFY RKLRHLKNYS FLNTLAISKI MKKYDKIASR SAAKPYMEMV
301: DKSYLTSSDE INKLMLRVES TFVEHFAGLN RSKGMNLLRP KVKKEKHRIT FSTGFFVGCT VSLVVALVMF IHARNIMGAV GHKVYMETMF PLYSLFAFVV
401: LHMIMYASNI YFWKRYRVNY PFIFGFKEGT ELGYRHVLLL SFGLGTLALC AVLINLDMEM DPNTNDYKTM TELLPMFILA LVVAILFCPF NIFYRSSRVF
501: FLMVVFRCIA APLYKVNLPD FFLADQLTSQ VQALRSLEFY ICYYGWGDFK HRQNTCRSSD VYSTFYFIVA VIPYWSRFLQ CVRRLIEEND SSQGYNALKY
601: LLTVVAVCLR TAYSFNRGNI WKISAWVFSA LATFYGTYWD IVFDWGLLHR PSKHLLREKL LVPHKAVYYV AIVLNIVLRM AWLQTVLDFN LSFLHRETMI
701: ALLAALEIIR RGIWNFFRLE NEHLNNVGKF RAFKSVPLPF NYNEEEDRDS
Arabidopsis Description
PHO1-H7Phosphate transporter PHO1 homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.