Factsheet for TraesCS6D01G364200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G388400.1
TraesCS1B01G415800.1
TraesCS1D01G396300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23430.1	TraesCS1A01G388400.1	AT2G33770.1	22634761
AT3G23430.1	TraesCS1B01G415800.1	AT2G33770.1	22634761
AT3G23430.1	TraesCS1D01G396300.1	AT2G33770.1	22634761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051945_P001	Maize	peroxisome, plasma membrane, plastid	72.95	64.38
TraesCS6B01G418000.1	Wheat	cytosol	94.67	59.15
TraesCS6D01G364300.1	Wheat	cytosol	90.98	56.92
TraesCS6D01G364100.1	Wheat	cytosol	89.96	55.57
TraesCS6D01G364600.1	Wheat	plastid	89.96	54.88
HORVU6Hr1G089190.23	Barley	cytosol	90.78	54.76
HORVU6Hr1G089130.9	Barley	cytosol	89.75	54.14
KRH72033	Soybean	cytosol, extracellular, golgi	13.32	52.0
CDY09011	Canola	cytosol, peroxisome, plasma membrane	61.89	50.5
Os02t0809800-01	Rice	cytosol	83.4	49.94
EES07731	Sorghum	cytosol, nucleus, plasma membrane	80.12	48.15
Zm00001d018445_P004	Maize	cytosol, nucleus, plasma membrane	78.28	47.45
KRH07887	Soybean	extracellular, golgi, mitochondrion, plasma membrane	10.66	44.44
CDX85098	Canola	cytosol, peroxisome, plasma membrane	50.2	43.44
GSMUA_Achr1P20470_001	Banana	nucleus	66.19	40.94
GSMUA_Achr6P36590_001	Banana	cytosol	65.16	39.11
Bra023727.1-P	Field mustard	cytosol	62.3	38.78
Bra014948.1-P	Field mustard	cytosol	62.09	38.65
VIT_05s0049g01410.t01	Wine grape	cytosol	62.09	38.02
KRH34432	Soybean	cytosol	59.84	37.73
KRH31683	Soybean	cytosol, nucleus, plasma membrane	59.02	37.7
AT3G23430.1	Thale cress	cytosol, nucleus, plasma membrane	60.25	37.6
PGSC0003DMT400044207	Potato	cytosol, nucleus, plasma membrane	60.45	37.34
KRH69098	Soybean	cytosol	58.2	37.22
KRG92358	Soybean	cytosol	59.02	37.21
CDX77515	Canola	cytosol	61.89	37.19
Solyc09g090360.2.1	Tomato	cytosol	60.04	37.18
CDY18123	Canola	cytosol	52.46	33.55
TraesCS7D01G231300.1	Wheat	cytosol, peroxisome, plasma membrane	51.64	29.47
TraesCS5D01G074100.1	Wheat	plasma membrane	21.11	24.29
TraesCS7D01G365900.3	Wheat	plasma membrane	21.11	23.79
CDY09013	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G364200.1	EnsemblPlantsGene:TraesCS6D01G364200	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:EXS_C
InterPro:IPR004331	InterPro:IPR004342	InterPro:SPX_dom	PANTHER:PTHR10783	PANTHER:PTHR10783:SF80	PFAM:PF03105
PFAM:PF03124	PFscan:PS51380	PFscan:PS51382	TMHMM:TMhelix	MapMan:24.2.7.4	MapMan:25.3.2.2

Description

No Description!

Coordinates

chr6D:+:454213864..454217716

Molecular Weight (calculated)

56835.9 Da

IEP (calculated)

9.866

GRAVY (calculated)

0.180

Length

488 amino acids

Sequence
(BLAST)

001: MALYRGLELL KKFSSLNIKA FTKILKKFVK VSEQQRATDL FSQKVKTSSF STSDKVLQLS DEVESLFLKH FAGNDRMVAM KYLNPQQRKS THMITFLVGL
101: FTGTFVSLFI IYTILAHASG IFASAGDTAY KELVYHVFSM FGLISLHCFL YGCNLFMWKS TRINQNFIFD FMPNTALTHR DAFLMSAFIM CTVVTALVIN
201: LFLIDAGVSY PNAVPGALIV LSAGVLFCPF NVFYRSTRYC FMRIMRNIIF SPFYKVLMAD FFMADQLTSQ VPLLRHMEFA ACYFMAGSFR ANPYETCTNS
301: QQYKHLAYVI SFLPYYWRAM QCLRSYLEEH DVDQLAHAGK YMSAMVAAAV RFKYKATPTP FWVWMVLISS TGTTAYQLYW DFVKDWGFFT PKSKNLWLRD
401: DLILKNKFTY YVSMMLNLVL RLSWTKSVMK IPINKNETRL LDFFRASLEI IRRGQWNFYR MENEHLNNVG KFRAVKTVPL PFQELEMY

Best Arabidopsis Sequence Match ( AT1G35350.2 )
(BLAST)

001: MGIKVEENVS NGGDSTKETA PEALSVLDRI RLNKNQENPL STIRNVLKLS NKEDIKFTKE NLKKIEERLK NVFIEFYRKL RHLKNYSFLN TLAISKIMKK
101: YDKIALRNAA KLYMEMVDKS YLTSSDEINK LMLRVESIFV EHFAGSNRSK GMNLLRPKVT KEKHRITFST GFFVGCTVSL VIALGLFIHA RNIMGAVGHK
201: LYMETMFPLY SLFAFVVLHM IMYASNIYFW KRYRVNYPFI FGFKEGTELG YGHVLLLSFG LGTLALCAVL VNMDMEMDPN TNDYKTITEL VPLFVVALVI
301: AISVCPFNIF YRSSRFFFLM VLFRCIAAPL YKVNLPDFFL ADQLTSQVQA LRSLEFYICY YGWGDFKQRQ STCKSSDVYS TFYFIVAVIP YWSRFLQCVR
401: RLIEEKDVSQ GFNALKYLLT IVAVCLRTAF SINRGNDWKI AAWVFSGLAT FYGTYWDIVY DWGLLHRPSK SWLREKLLVP HKSVYYVAMV VNVVLRLAWL
501: QTVLDFNISF LHRETMVALI AILEIIRRGI WNFFRLENEH LNNVGKFRAF KSVPLPFNYD EEEDRDS

Arabidopsis Description

PHO1-H8Phosphate transporter PHO1 homolog 8 [Source:UniProtKB/Swiss-Prot;Acc:Q6R8G2]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.