Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G396300.1 | Wheat | nucleus | 98.93 | 97.66 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 97.86 | 97.4 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 97.27 | 97.16 |
| Os05t0557700-01 | Rice | cytosol | 81.61 | 78.54 |
| EES19930 | Sorghum | cytosol | 80.66 | 78.07 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 18.03 | 63.07 |
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 13.05 | 51.16 |
| TraesCS2A01G441700.1 | Wheat | cytosol | 14.59 | 49.4 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 51.96 | 48.99 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 79.48 | 46.53 |
| CDY53783 | Canola | nucleus | 43.89 | 43.68 |
| CDY37693 | Canola | nucleus | 43.77 | 42.66 |
| PGSC0003DMT400076435 | Potato | nucleus | 46.74 | 42.55 |
| Bra021874.1-P | Field mustard | nucleus | 43.65 | 42.54 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 47.45 | 42.37 |
| Solyc02g078210.2.1 | Tomato | cytosol | 46.14 | 42.05 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 46.5 | 42.02 |
| KRH21442 | Soybean | nucleus | 45.55 | 41.78 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 18.51 | 41.71 |
| KRH50043 | Soybean | cytosol | 45.79 | 41.64 |
| KRH10881 | Soybean | nucleus | 44.96 | 41.02 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 17.79 | 40.87 |
| AT2G33770.1 | Thale cress | nucleus | 43.89 | 40.79 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 19.93 | 33.94 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 18.27 | 33.92 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 19.1 | 32.66 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 20.17 | 32.08 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 21.12 | 31.73 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 39.5 | 29.92 |
| TraesCS2A01G403400.1 | Wheat | cytosol | 31.67 | 26.94 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 30.49 | 26.41 |
| TraesCS3A01G031600.1 | Wheat | cytosol | 31.2 | 26.38 |
| TraesCS3A01G030400.1 | Wheat | plasma membrane | 30.96 | 26.18 |
Protein Annotations
| MapMan:25.3.1.2 | Gene3D:3.10.110.10 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006817 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 |
| GO:GO:0009991 | GO:GO:0016036 | GO:GO:0019538 | GO:GO:0044257 | GO:GO:0055062 | GO:GO:2000185 |
| InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 |
| SMART:SM00212 | SUPFAM:SSF54495 | EnsemblPlantsGene:TraesCS1A01G388400 | EnsemblPlants:TraesCS1A01G388400.1 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:556938656..556942747
Molecular Weight (calculated)
93739.6 Da
IEP (calculated)
4.500
GRAVY (calculated)
-0.244
Length
843 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLFVIDSDS ESYSGTSDSE DQECEFTDHA QSILSSLDES IGKIDDFLTF ERGFLHGDIV CPVSDPSGQL GRVVGVEMFV DLETYSGDII EDVNSKQLSR
101: VRSFVSGDCV VMGPWIGRVI RAFDLVTVVF SDGAKCEMLL RDSEVLKPIP PFIFEDAPYF YYPSQRVRIV HPSVSKSGTW LSGSWRASRD EGVVSHVDVG
201: LVHVNWITSV ANVWGDRSSS PPNFQDPKNL TLLSCFPYAN WQLGDWCTLS AGHDGSLPSE DRKCSRYSQT YVVAKTKSTF DVLWQNGSIS LGLEPYILAP
301: VSTPGDHDFW PGQFVLEKLA VEEAAERQRI GIVRNVDALE RTVNVKWIVP VDDDIVRYGS DPTEETVSAY ELVEHPDFSF CTGEVVIRSA LNIDKSEADL
401: TNGTMTVSRK SLDTSSGFLS CIGNVLGYKD DGIEVQWASG VISKAQHFEI IGLERLLDNS LESVNEVHTS VDDEAEQETN HHESTKNALE ESGEDCTGSL
501: RNAFYFSKTA FDFLTNVASS FFGAHDSTSS SSITTDPQYQ IVKSADLHSS AEEFSVVELV MQTEKPQLPS ENDVKIFDVV VDCSDHHFVK ERGHENVKRG
601: WLKKIQQEWT ILQNDLPDDI HVRVYEERMD LLRACIVGAA GTPYHDNLFF FDIFFPPDYP HEPPSVHYHS GGLRLNPNLY ETGKVCLSLL KTWAGTGNEV
701: WNPEGSTVLQ LLLSLQALVL NEKPYFNEAG YDKFVGKADG EKNSITYNEN AFLLSCKSMM YILHKPPKHF ENFVKEHFTC RAPHILEACN AYLGGDLVGH
801: ACDSTYISDD GCKSCSTGFK IMLGKQLPKL VAAFSEAGIA CGQ
101: VRSFVSGDCV VMGPWIGRVI RAFDLVTVVF SDGAKCEMLL RDSEVLKPIP PFIFEDAPYF YYPSQRVRIV HPSVSKSGTW LSGSWRASRD EGVVSHVDVG
201: LVHVNWITSV ANVWGDRSSS PPNFQDPKNL TLLSCFPYAN WQLGDWCTLS AGHDGSLPSE DRKCSRYSQT YVVAKTKSTF DVLWQNGSIS LGLEPYILAP
301: VSTPGDHDFW PGQFVLEKLA VEEAAERQRI GIVRNVDALE RTVNVKWIVP VDDDIVRYGS DPTEETVSAY ELVEHPDFSF CTGEVVIRSA LNIDKSEADL
401: TNGTMTVSRK SLDTSSGFLS CIGNVLGYKD DGIEVQWASG VISKAQHFEI IGLERLLDNS LESVNEVHTS VDDEAEQETN HHESTKNALE ESGEDCTGSL
501: RNAFYFSKTA FDFLTNVASS FFGAHDSTSS SSITTDPQYQ IVKSADLHSS AEEFSVVELV MQTEKPQLPS ENDVKIFDVV VDCSDHHFVK ERGHENVKRG
601: WLKKIQQEWT ILQNDLPDDI HVRVYEERMD LLRACIVGAA GTPYHDNLFF FDIFFPPDYP HEPPSVHYHS GGLRLNPNLY ETGKVCLSLL KTWAGTGNEV
701: WNPEGSTVLQ LLLSLQALVL NEKPYFNEAG YDKFVGKADG EKNSITYNEN AFLLSCKSMM YILHKPPKHF ENFVKEHFTC RAPHILEACN AYLGGDLVGH
801: ACDSTYISDD GCKSCSTGFK IMLGKQLPKL VAAFSEAGIA CGQ
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.