Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G388400.1 | Wheat | cytosol | 97.66 | 98.93 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 96.72 | 97.52 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 95.78 | 96.92 |
| Os05t0557700-01 | Rice | cytosol | 80.44 | 78.42 |
| EES19930 | Sorghum | cytosol | 79.63 | 78.07 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 17.92 | 63.49 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 51.17 | 48.88 |
| TraesCS7D01G206600.1 | Wheat | cytosol | 13.23 | 48.5 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 12.76 | 47.6 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 78.81 | 46.74 |
| CDY53783 | Canola | nucleus | 43.21 | 43.57 |
| PGSC0003DMT400076435 | Potato | nucleus | 46.14 | 42.55 |
| CDY37693 | Canola | nucleus | 43.09 | 42.54 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 46.96 | 42.48 |
| Bra021874.1-P | Field mustard | nucleus | 42.97 | 42.43 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 46.25 | 42.34 |
| Solyc02g078210.2.1 | Tomato | cytosol | 45.55 | 42.05 |
| KRH21442 | Soybean | nucleus | 45.2 | 42.0 |
| KRH50043 | Soybean | cytosol | 45.55 | 41.96 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 18.27 | 41.27 |
| KRH10881 | Soybean | nucleus | 44.61 | 41.23 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 17.68 | 41.03 |
| AT2G33770.1 | Thale cress | nucleus | 43.33 | 40.79 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 15.46 | 38.6 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 18.15 | 34.37 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 19.67 | 33.94 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 16.98 | 32.01 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 19.79 | 31.89 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 20.61 | 31.48 |
| TraesCS1D01G125200.2 | Wheat | plastid | 18.74 | 30.71 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 38.64 | 29.65 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 32.08 | 27.93 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 30.56 | 26.82 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 31.38 | 26.8 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 30.8 | 26.3 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 29.86 | 25.35 |
Protein Annotations
| MapMan:25.3.1.2 | Gene3D:3.10.110.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006817 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0016036 | GO:GO:0019538 | GO:GO:0044257 | GO:GO:0055062 | GO:GO:2000185 | InterPro:IPR000608 |
| InterPro:IPR016135 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | SMART:SM00212 |
| SUPFAM:SSF54495 | EnsemblPlantsGene:TraesCS1D01G396300 | EnsemblPlants:TraesCS1D01G396300.1 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | SEG:seg |
Description
No Description!
Coordinates
chr1D:-:464593200..464597725
Molecular Weight (calculated)
94826.2 Da
IEP (calculated)
4.543
GRAVY (calculated)
-0.222
Length
854 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKCGVAGLG EMDLFVIDSD SESYSGTSDS EDQECEFTDH AQSILSSLDE SIGKIDDFLT FERGFLHGDI VCPVSDPSGQ LGRVVGVEMF VDLETYSGDI
101: IEDVNSKQLS RVRSFVSGDC VVMGPWMGRV IRAFDLVTVV FSDGAKCEML LRDSEVLKPI PPFIFEDAPY FYYPSQRVRI VHPSVSKSGT WLSGSWRASR
201: DEGVVSHVDV GLVHVNWITS VANVWGDRSS SPPNFQDPKN LTLLSCFPYA NWQLGDWCTL SAGHDGSLPS EDRKCSRYSQ TYVVAKTKST FDVLWQNGSI
301: SLGLEPYILA PVSTPGDHDF WPGQFVLEKL AVEEAAERQR IGIVRNVDAL ERTVNVKWIV PVDDDIVRYG SDPTEETVSA YELVEHPDFS FCTGEVVIRS
401: ALNIDKSEAD LTNGTMTVSR KSLDTSSGFL SCIGNVLGYK DDGIEVQWAS GVISKAQHFE IIGLERLLDN SLESVNEVHT SVDDEAEQET IHHESTKNAL
501: EESGEDCTGS LRNAFYFSKT AFDFLTNVAS SFFGAHDSTS SSSITADPQY QIVKSADLHS SAEEFSVVEL VMQTEKPQLP SENDVKIFDV VVDCSDHHFV
601: KERGHENVKR GWLKKIQQEW TILQNDLPDD IHVRVYEERM DLLRACIVGA AGTPYHDNLF FFDIFFPPDY PHEPPSVHYH SGGLRLNPNL YETGKVCLSL
701: LKTWAGTGNE VWNPEGSTVL QLLLSLQALV LNEKPYFNEA GYDKFVGKAD GEKNSITYNE NAFLLSCKSM MYILHKPPKH FEKFVKEHFT CRAPHILEAC
801: NAYLGGDLIG HARDSTYISD DGCKGCSTGF KIMLGKLLPK LVAAFCEAGI ACGQ
101: IEDVNSKQLS RVRSFVSGDC VVMGPWMGRV IRAFDLVTVV FSDGAKCEML LRDSEVLKPI PPFIFEDAPY FYYPSQRVRI VHPSVSKSGT WLSGSWRASR
201: DEGVVSHVDV GLVHVNWITS VANVWGDRSS SPPNFQDPKN LTLLSCFPYA NWQLGDWCTL SAGHDGSLPS EDRKCSRYSQ TYVVAKTKST FDVLWQNGSI
301: SLGLEPYILA PVSTPGDHDF WPGQFVLEKL AVEEAAERQR IGIVRNVDAL ERTVNVKWIV PVDDDIVRYG SDPTEETVSA YELVEHPDFS FCTGEVVIRS
401: ALNIDKSEAD LTNGTMTVSR KSLDTSSGFL SCIGNVLGYK DDGIEVQWAS GVISKAQHFE IIGLERLLDN SLESVNEVHT SVDDEAEQET IHHESTKNAL
501: EESGEDCTGS LRNAFYFSKT AFDFLTNVAS SFFGAHDSTS SSSITADPQY QIVKSADLHS SAEEFSVVEL VMQTEKPQLP SENDVKIFDV VVDCSDHHFV
601: KERGHENVKR GWLKKIQQEW TILQNDLPDD IHVRVYEERM DLLRACIVGA AGTPYHDNLF FFDIFFPPDY PHEPPSVHYH SGGLRLNPNL YETGKVCLSL
701: LKTWAGTGNE VWNPEGSTVL QLLLSLQALV LNEKPYFNEA GYDKFVGKAD GEKNSITYNE NAFLLSCKSM MYILHKPPKH FEKFVKEHFT CRAPHILEAC
801: NAYLGGDLIG HARDSTYISD DGCKGCSTGF KIMLGKLLPK LVAAFCEAGI ACGQ
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.