Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 18.57 | 68.88 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 49.33 | 52.07 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 48.99 | 51.96 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 48.99 | 51.9 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 48.88 | 51.17 |
| Os05t0557700-01 | Rice | cytosol | 49.78 | 50.8 |
| EES19930 | Sorghum | cytosol | 49.33 | 50.63 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 16.44 | 49.16 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 51.9 | 49.15 |
| CDY53783 | Canola | nucleus | 45.86 | 48.41 |
| CDY37693 | Canola | nucleus | 46.09 | 47.63 |
| Bra021874.1-P | Field mustard | nucleus | 45.86 | 47.4 |
| PGSC0003DMT400076435 | Potato | nucleus | 48.77 | 47.08 |
| Solyc02g078210.2.1 | Tomato | cytosol | 48.1 | 46.49 |
| KRH21442 | Soybean | nucleus | 47.76 | 46.46 |
| KRH10881 | Soybean | nucleus | 47.32 | 45.78 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 47.2 | 45.23 |
| AT2G33770.1 | Thale cress | nucleus | 45.3 | 44.65 |
| KRH50043 | Soybean | cytosol | 46.2 | 44.55 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 22.6 | 40.81 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 20.02 | 39.08 |
| GSMUA_Achr10P... | Banana | nucleus | 19.46 | 36.55 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 21.03 | 35.01 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 37.81 | 34.28 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 36.02 | 31.45 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 48.1 | 29.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P06210_001 | EnsemblPlants:GSMUA_Achr9T06210_001 | EnsemblPlantsGene:GSMUA_Achr9G06210_001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | PFAM:PF00179 | PFscan:PS50127 |
| SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI000296BB74 | UniProt:M0TXY0 | MapMan:25.3.1.2 |
Description
Putative Probable ubiquitin-conjugating enzyme E2 24 [Source:GMGC_GENE;Acc:GSMUA_Achr9G06210_001]
Coordinates
chr9:-:3975372..3982566
Molecular Weight (calculated)
100399.0 Da
IEP (calculated)
4.901
GRAVY (calculated)
-0.287
Length
894 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALFVDSDS DSYSEFSDSE NQDCNESLFG GHAQSILSGL DESIGKIDDF LAFERHFALG DFVCSITDPS GQLGRVVDVD LIVDLETTSG GLVKDVNSKK
101: LLRLRSFASG DFVVYGPWLG RIEKTFDAVT ILFNNGAKFE ILIRDSKDLT LLYPSFEDAS FPLHPGQRVK INLPTISQSK TWFCGSLKAS QDEGIICHVE
201: VGLVYVSWVA SVVGQSIHSS TPPHFQDPKN LTLLSCFSHA NWQLGDRCTL PVDYHNVTAE NSGTLSSPKC FTNMQKELDM ETLQMYVIAK TRSKVDVLWQ
301: NGERSVGVCT QSLSPVSNIG DHDFWPGQFV LEKVTTEEVH VPQPQGLGIV KNVDSHEQIV KVKWMLPELN KNVDFSGDFT EFTEETVSAY ELIEHPDFTY
401: CIGDAVLRQI PCVQKVGENI LDVQNISWKE RHNLPDLQGY LSCIGNVIGY KDEGIEVKWA NGVISKVMPF EIVGPDRLLH PALTPSATME SFPPNVDKDL
501: TDQEKQSWNM RQKKSTDDSG GFCMKDVWKA ASALFPGAAF GFLTHVATSL FCSRGSTSLP DPEFSQYRNL KMEEYISEPT DLQPENLKQQ IEETKQSGGM
601: TFSPGSDEPR KFKQFDIVND HTDHHFVNGI GNELMLSHYP QVKKGWFKRV QQEWSFLKND LPDTIYVRVY EERMDLLRAS MIGAPGTPYH DGLFFFDIFL
701: PFDYPHEPPV VHYISGGLRL NPNLYESGKV CLSLLKTWMG SGSEVWDPEN STILQVLLSL QALVLNEKPY FNEAGYDEQI GRVEAEKNSI TYNENAFLQS
801: CKSMLYILRR PPKHFEALVE EHFTHRSHHI LSACKAYLDG AQVGHADACR EAADKCHNSC STGFKIMLAK LLPKLVSAFT ERGIDCTQFL DVLN
101: LLRLRSFASG DFVVYGPWLG RIEKTFDAVT ILFNNGAKFE ILIRDSKDLT LLYPSFEDAS FPLHPGQRVK INLPTISQSK TWFCGSLKAS QDEGIICHVE
201: VGLVYVSWVA SVVGQSIHSS TPPHFQDPKN LTLLSCFSHA NWQLGDRCTL PVDYHNVTAE NSGTLSSPKC FTNMQKELDM ETLQMYVIAK TRSKVDVLWQ
301: NGERSVGVCT QSLSPVSNIG DHDFWPGQFV LEKVTTEEVH VPQPQGLGIV KNVDSHEQIV KVKWMLPELN KNVDFSGDFT EFTEETVSAY ELIEHPDFTY
401: CIGDAVLRQI PCVQKVGENI LDVQNISWKE RHNLPDLQGY LSCIGNVIGY KDEGIEVKWA NGVISKVMPF EIVGPDRLLH PALTPSATME SFPPNVDKDL
501: TDQEKQSWNM RQKKSTDDSG GFCMKDVWKA ASALFPGAAF GFLTHVATSL FCSRGSTSLP DPEFSQYRNL KMEEYISEPT DLQPENLKQQ IEETKQSGGM
601: TFSPGSDEPR KFKQFDIVND HTDHHFVNGI GNELMLSHYP QVKKGWFKRV QQEWSFLKND LPDTIYVRVY EERMDLLRAS MIGAPGTPYH DGLFFFDIFL
701: PFDYPHEPPV VHYISGGLRL NPNLYESGKV CLSLLKTWMG SGSEVWDPEN STILQVLLSL QALVLNEKPY FNEAGYDEQI GRVEAEKNSI TYNENAFLQS
801: CKSMLYILRR PPKHFEALVE EHFTHRSHHI LSACKAYLDG AQVGHADACR EAADKCHNSC STGFKIMLAK LLPKLVSAFT ERGIDCTQFL DVLN
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.