Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P34010_001 | Banana | cytosol | 67.34 | 64.84 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 59.53 | 55.22 |
| CDX72600 | Canola | cytosol | 6.69 | 55.0 |
| EES02568 | Sorghum | nucleus | 59.74 | 53.26 |
| Zm00001d008520_P001 | Maize | nucleus | 59.33 | 53.09 |
| Solyc01g111680.2.1 | Tomato | nucleus | 52.74 | 52.42 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 58.22 | 52.09 |
| Zm00001d040036_P022 | Maize | nucleus | 57.71 | 51.77 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 57.91 | 51.3 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 57.91 | 51.26 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 57.71 | 51.12 |
| KRG90672 | Soybean | nucleus | 57.3 | 50.27 |
| CDX89761 | Canola | nucleus | 52.54 | 49.47 |
| PGSC0003DMT400015781 | Potato | nucleus | 56.49 | 48.02 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 58.62 | 47.77 |
| AT2G16920.1 | Thale cress | nucleus | 52.64 | 47.1 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 13.59 | 44.82 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 28.8 | 42.26 |
| Bra017778.1-P | Field mustard | cytosol | 38.03 | 41.9 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 49.8 | 40.51 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 49.8 | 39.5 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 34.28 | 37.81 |
| GSMUA_Achr10P... | Banana | nucleus | 17.44 | 36.13 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 16.73 | 36.03 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 17.75 | 32.59 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 14.1 | 28.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P26360_001 | EnsemblPlants:GSMUA_Achr1T26360_001 | EnsemblPlantsGene:GSMUA_Achr1G26360_001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | PFAM:PF00179 | PFscan:PS50127 |
| SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI00029581CF | UniProt:M0S393 | MapMan:35.1 |
Description
Probable ubiquitin-conjugating enzyme E2 23 [Source:GMGC_GENE;Acc:GSMUA_Achr1G26360_001]
Coordinates
chr1:+:21806683..21811782
Molecular Weight (calculated)
109628.0 Da
IEP (calculated)
4.439
GRAVY (calculated)
-0.455
Length
986 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVNNGPDAI DSAPNASCFD VASRSKVGKP VETGELNDAQ AKDIFVYRQD VVKCCKRDGL LGIVVQVAGD SDSEGSISDD DGSEEDGNKV DESNGGDNGV
101: INNNIEGGDN IGSLQDGQVR VTWSDGSETM ENTSDITVVD RSFLHGDIVA SATDPTGQLG LIVDVDITVD LLSPNGEVIR NVSSKDLKRI REFSVGDFVV
201: LGPWLGRVDE VLDNVTVLFD DGSVCKVVKA DPMRLKPVLK PIVDDADCPY YPGQRVRAVS SSVFKSSRWL SGLWKANRLE GAVIKVQAGS VVVYWIASAY
301: LGVGTNSATV PSEEQNPKNL TLLSCFSHTN WQLADWCLLS SYPQPSTLPA HESWPAYRKK LRKVFFKRDK KARRRDENFE KALLIVNTVT KVNVAWQNGE
401: KEFGLQSTSL IPIHTPNDHE FFPEQYVIDK ASNEGDGASE TNRLGVVRSV NSQEQTVCVR WLKPVSRPED LKEFDHEEVV SAYELDGHPD YDYCYGDVVR
501: RTQDTADDSS REHKDNSEEN QTQNDEICGN FTSLSWVGNI VGLQDGDIEV TWADGMVSKV GPQEIYVVGR DDDDDGLSDD GASWETVDEN EMDIFDDTEK
601: EVDPQNPTDN TVQREKSATT SVEDGTGGRS GPLAVPLAAL DFVTKLATGL FSRTRKHTLD EAYENRATEE AELKIEDSIV KPTLMGLYDG NQRDYSMDDL
701: CNFSHFDVTE NPLDHHFHGD AEMSNGGRKW VKKVQQEWTI LEKNLPDAIY VRVFEDRMDL IRAVIIGACG TPYQDGLFFF DFQLPPEYPQ VPPSVYYHSG
801: GLRVNPNLYV DGKVCLSLLN TWTGKGNEVW DPSSSSILQV LVSLQGLVLN DKPYFNEAGY EKQIGTVEGE KNALPYNENT YLLNLKSMLY LLRRPPVHFE
901: VFVKDQFRRR GHYILKACEA YMDGCLIGSL TKDACLTETS RKHSCSVGFK LTLAKILPRL IPALKEVGAD CHQFDYLLKV ENLSES
101: INNNIEGGDN IGSLQDGQVR VTWSDGSETM ENTSDITVVD RSFLHGDIVA SATDPTGQLG LIVDVDITVD LLSPNGEVIR NVSSKDLKRI REFSVGDFVV
201: LGPWLGRVDE VLDNVTVLFD DGSVCKVVKA DPMRLKPVLK PIVDDADCPY YPGQRVRAVS SSVFKSSRWL SGLWKANRLE GAVIKVQAGS VVVYWIASAY
301: LGVGTNSATV PSEEQNPKNL TLLSCFSHTN WQLADWCLLS SYPQPSTLPA HESWPAYRKK LRKVFFKRDK KARRRDENFE KALLIVNTVT KVNVAWQNGE
401: KEFGLQSTSL IPIHTPNDHE FFPEQYVIDK ASNEGDGASE TNRLGVVRSV NSQEQTVCVR WLKPVSRPED LKEFDHEEVV SAYELDGHPD YDYCYGDVVR
501: RTQDTADDSS REHKDNSEEN QTQNDEICGN FTSLSWVGNI VGLQDGDIEV TWADGMVSKV GPQEIYVVGR DDDDDGLSDD GASWETVDEN EMDIFDDTEK
601: EVDPQNPTDN TVQREKSATT SVEDGTGGRS GPLAVPLAAL DFVTKLATGL FSRTRKHTLD EAYENRATEE AELKIEDSIV KPTLMGLYDG NQRDYSMDDL
701: CNFSHFDVTE NPLDHHFHGD AEMSNGGRKW VKKVQQEWTI LEKNLPDAIY VRVFEDRMDL IRAVIIGACG TPYQDGLFFF DFQLPPEYPQ VPPSVYYHSG
801: GLRVNPNLYV DGKVCLSLLN TWTGKGNEVW DPSSSSILQV LVSLQGLVLN DKPYFNEAGY EKQIGTVEGE KNALPYNENT YLLNLKSMLY LLRRPPVHFE
901: VFVKDQFRRR GHYILKACEA YMDGCLIGSL TKDACLTETS RKHSCSVGFK LTLAKILPRL IPALKEVGAD CHQFDYLLKV ENLSES
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.