Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 92.65 | 80.03 |
| AT2G16920.1 | Thale cress | nucleus | 82.81 | 78.68 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 92.55 | 77.96 |
| CDX72600 | Canola | cytosol | 7.35 | 64.17 |
| Solyc01g111680.2.1 | Tomato | nucleus | 57.78 | 60.99 |
| KRG90672 | Soybean | nucleus | 62.46 | 58.19 |
| PGSC0003DMT400015781 | Potato | nucleus | 62.27 | 56.21 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 35.43 | 55.21 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 63.71 | 55.12 |
| CDY30673 | Canola | nucleus | 9.26 | 53.59 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 49.47 | 52.54 |
| CDY51802 | Canola | cytosol | 9.46 | 48.29 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 47.66 | 46.94 |
| Zm00001d008520_P001 | Maize | nucleus | 48.42 | 46.01 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 44.99 | 46.0 |
| EES02568 | Sorghum | nucleus | 48.23 | 45.66 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 48.04 | 45.64 |
| Zm00001d040036_P022 | Maize | nucleus | 47.85 | 45.59 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 47.95 | 45.1 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 47.95 | 45.06 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 47.85 | 45.01 |
| CDY25883 | Canola | cytosol | 10.98 | 40.64 |
| CDY53783 | Canola | nucleus | 32.76 | 40.5 |
| CDY25884 | Canola | plastid | 12.8 | 40.48 |
| CDY37693 | Canola | nucleus | 32.57 | 39.42 |
| CDX71178 | Canola | cytosol | 14.23 | 34.57 |
| CDY55875 | Canola | nucleus | 13.75 | 33.72 |
| CDX82439 | Canola | cytosol | 14.33 | 32.68 |
| CDY02528 | Canola | cytosol | 14.61 | 31.88 |
| CDY47562 | Canola | cytosol | 14.61 | 31.74 |
| CDY24125 | Canola | cytosol | 14.52 | 31.28 |
| CDX75824 | Canola | cytosol | 13.85 | 31.05 |
| CDY25886 | Canola | cytosol | 13.56 | 30.54 |
| CDY26018 | Canola | cytosol | 14.71 | 30.32 |
| CDX98552 | Canola | cytosol | 14.71 | 28.31 |
| CDX97660 | Canola | cytosol | 14.61 | 27.72 |
| CDY20117 | Canola | nucleus | 15.09 | 26.42 |
| CDY21838 | Canola | cytosol | 15.28 | 24.65 |
Protein Annotations
| EnsemblPlants:CDX89761 | EnsemblPlantsGene:GSBRNA2T00150199001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX89761 |
| ProteinID:CDX89761.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EEF8E3 | MapMan:35.1 |
Description
BnaC03g46750D
Coordinates
chrLK031860:-:1523809..1528604
Molecular Weight (calculated)
116468.0 Da
IEP (calculated)
4.357
GRAVY (calculated)
-0.652
Length
1047 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEHEQDDPGV DLPLDDSLES EPICDDPTHP NIYRHDIVRN NKTGSIGVVS EVAGDSDSES DISDEQNDGS DDDDEDDDDD DDAAEEEGKK ANEDNVGRGE
0101: KKAGGNYKCG TLEGDQIRVL WMDDTEPVQD VNNVTVVDRG FLHGDYVASS SDPTGQVGVV VDVDMSVDLL ALDGSTHKDI STKELKRVRD FCVGDYVVHG
0201: PWLGRIDDVL DNVTVLFDDG SMCRVLRAEP LQLKPVSQSN LEEDANFPYY PGQRVKATSS SVFKSSRWLS GLWKPNRLEG TVTKVTAGSI FVYWIASAGF
0301: GPDSAVSPPE EQSPSNLTLL SSFTHANWQV GDWGLLPSVN QSATIPLHKH VSKLRLYDSQ ARKADREQNK SDLEDEASVK SEPVGITAEA LPKETTVSST
0401: SKEPAHEPWP LHRKKIRKLV IRKDKRVKKK EESFERALLI VNSRTLVDVA WQDGTVEYRR EATTLIPIET PGDQEFVPEQ YVVEKASDED DSTTEPKRVG
0501: VVKSVNAKER TASVRWLKPR LTAEEPREFD KEEIASVYEL EVHPDYDYCY GDIVVRLSPV TMALPASSEA TEQDNGHQDA EYHQEAIVRD KEQNDVDMNL
0601: SELSWVGNIT GLKDGDIEVT WADGMVSTVG PQAIYVVGRD DDESIAAESE ASDAASWETV DDDDKGGAPE EDLGRGSFLE ENSDAENNGE NDSGRNGALA
0701: LPLAAVEFMT RMASGIFSRG QKTEDSSSSS LTDDNGYKQA EVTNSSQERG SFLDDHKPIP SESDSCSFKR FDISQDPLDH HYLGSDEQKT KERRWFKKVD
0801: QDWKILQNNL PDGIFVRVYE DRMDLLRAVI AGAYGTPYQD GLFFFDFHLP SDYPSVPPSA HYHSGGWRLN PNLYEEGKVC LSLLNTWTGR GNEVWDPKSS
0901: SILQVLVSLQ GLVLNSKPYF NEAGYDKQIG TAEGEKNSLG YNENAFLLNC KTMMYLMRRP PKDFEELIKD HFRKRGYYIL KACDAYMKGY LIGSLSKDAS
1001: VIDVSCSANS NSVGFKLMLA KIAPKLFTAL SEVGADCNEF KHLQQQQ
0101: KKAGGNYKCG TLEGDQIRVL WMDDTEPVQD VNNVTVVDRG FLHGDYVASS SDPTGQVGVV VDVDMSVDLL ALDGSTHKDI STKELKRVRD FCVGDYVVHG
0201: PWLGRIDDVL DNVTVLFDDG SMCRVLRAEP LQLKPVSQSN LEEDANFPYY PGQRVKATSS SVFKSSRWLS GLWKPNRLEG TVTKVTAGSI FVYWIASAGF
0301: GPDSAVSPPE EQSPSNLTLL SSFTHANWQV GDWGLLPSVN QSATIPLHKH VSKLRLYDSQ ARKADREQNK SDLEDEASVK SEPVGITAEA LPKETTVSST
0401: SKEPAHEPWP LHRKKIRKLV IRKDKRVKKK EESFERALLI VNSRTLVDVA WQDGTVEYRR EATTLIPIET PGDQEFVPEQ YVVEKASDED DSTTEPKRVG
0501: VVKSVNAKER TASVRWLKPR LTAEEPREFD KEEIASVYEL EVHPDYDYCY GDIVVRLSPV TMALPASSEA TEQDNGHQDA EYHQEAIVRD KEQNDVDMNL
0601: SELSWVGNIT GLKDGDIEVT WADGMVSTVG PQAIYVVGRD DDESIAAESE ASDAASWETV DDDDKGGAPE EDLGRGSFLE ENSDAENNGE NDSGRNGALA
0701: LPLAAVEFMT RMASGIFSRG QKTEDSSSSS LTDDNGYKQA EVTNSSQERG SFLDDHKPIP SESDSCSFKR FDISQDPLDH HYLGSDEQKT KERRWFKKVD
0801: QDWKILQNNL PDGIFVRVYE DRMDLLRAVI AGAYGTPYQD GLFFFDFHLP SDYPSVPPSA HYHSGGWRLN PNLYEEGKVC LSLLNTWTGR GNEVWDPKSS
0901: SILQVLVSLQ GLVLNSKPYF NEAGYDKQIG TAEGEKNSLG YNENAFLLNC KTMMYLMRRP PKDFEELIKD HFRKRGYYIL KACDAYMKGY LIGSLSKDAS
1001: VIDVSCSANS NSVGFKLMLA KIAPKLFTAL SEVGADCNEF KHLQQQQ
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.