Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 97.94 | 95.49 |
| CDX89761 | Canola | nucleus | 80.03 | 92.65 |
| AT2G16920.1 | Thale cress | nucleus | 68.89 | 75.77 |
| Solyc01g111680.2.1 | Tomato | nucleus | 47.44 | 57.96 |
| KRG90672 | Soybean | nucleus | 51.57 | 55.6 |
| PGSC0003DMT400015781 | Potato | nucleus | 51.57 | 53.88 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 53.71 | 53.8 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 28.8 | 51.93 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 40.51 | 49.8 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 38.78 | 44.21 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 36.96 | 43.75 |
| CDY30673 | Canola | nucleus | 6.52 | 43.65 |
| CDX72600 | Canola | cytosol | 4.29 | 43.33 |
| EES02568 | Sorghum | nucleus | 39.27 | 43.04 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 39.11 | 43.01 |
| Zm00001d008520_P001 | Maize | nucleus | 39.11 | 43.01 |
| Zm00001d040036_P022 | Maize | nucleus | 38.78 | 42.77 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 39.03 | 42.5 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 39.03 | 42.46 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 38.94 | 42.41 |
| CDY51802 | Canola | cytosol | 6.6 | 39.02 |
| CDY53783 | Canola | nucleus | 26.49 | 37.9 |
| CDY37693 | Canola | nucleus | 26.4 | 36.99 |
| CDY25884 | Canola | plastid | 9.49 | 34.74 |
| CDY25883 | Canola | cytosol | 7.92 | 33.92 |
| CDX71178 | Canola | cytosol | 10.56 | 29.7 |
| CDY55875 | Canola | nucleus | 10.31 | 29.27 |
| CDX82439 | Canola | cytosol | 10.64 | 28.1 |
| CDY02528 | Canola | cytosol | 10.89 | 27.5 |
| CDY47562 | Canola | cytosol | 10.89 | 27.39 |
| CDX75824 | Canola | cytosol | 10.31 | 26.77 |
| CDY24125 | Canola | cytosol | 10.73 | 26.75 |
| CDY25886 | Canola | cytosol | 10.15 | 26.45 |
| CDY26018 | Canola | cytosol | 10.89 | 25.98 |
| CDX98552 | Canola | cytosol | 11.14 | 24.82 |
| CDX97660 | Canola | cytosol | 11.06 | 24.28 |
| CDY20117 | Canola | nucleus | 11.39 | 23.08 |
| CDY21838 | Canola | cytosol | 11.55 | 21.57 |
Protein Annotations
| Gene3D:3.10.110.10 | Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078ELY1 | EnsemblPlants:CDY02226 | ProteinID:CDY02226 |
| ProteinID:CDY02226.1 | ncoils:Coil | EnsemblPlantsGene:GSBRNA2T00113644001 | InterPro:IPR000608 | InterPro:IPR012677 | InterPro:IPR016135 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00179 | PFAM:PF15519 | PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 |
| InterPro:RBM39_linker | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0004EE4B17 | SEG:seg |
Description
BnaA03g39410D
Coordinates
chrLK031932:+:827699..834622
Molecular Weight (calculated)
134932.0 Da
IEP (calculated)
4.405
GRAVY (calculated)
-0.612
Length
1212 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYYLFYVFLY IKRLAIAKDL VLFRSCLLNT LQFARLEDAR NALNLNGQLE IAGRAIKNNG DLDDDDGQVL VSSFLKLANL SSKREHISSP RCSAISIGGS
0101: SRKRGFSAVV GIPAVVDPVG APSECLLLKN MFDPSTETEP EFDFDEHIKE DVKDECSKFG ELNHIFVDKN SIGFLSTCHL KMRKQQWECN MLSMMEHEQD
0201: DPGVDLPLDG SLESEPICDD PSRIDKADDS GSNEHPNIYR HDIVRNNKTG SIGVVSEVAG DSDSESDISD EENDGDDDED DDNDDDDGAE EEGKNANEEN
0301: VGRGEKNYKC GTLEGDQIRV LWMDDTEPVQ DVNNVTVVDR GFLHGDYVAS SSDPTGQVGV VVDVDMSVDL LALDGSTHKD ISTKELKRVR DFCVGDYVVH
0401: GPWLGRIDDV LDNVTVLFDD GSMCRVLRAE PLQLKPVSQS NLEEDANFPY YPGQRVKATS SSVFKSSRWL SGLWKPNRLE GTVTKVTAGS IFVYWIASAG
0501: FGPDSAVSPP EEQSPSNLTL LSSFTHANWQ VGDWGLLPSV NQSATIPLHK HVSKLRLYDS QAKRADREQN KSDLEDELSE EKSEPVGITG EALPKETTVS
0601: STSKEPAHEP WPLHRKKIRK LVIRKDKRVK KKEESFERAL LIVNSRTLVD VAWQDGTVEC RREATTLIPI ETPGDQEFVP EQYVVEKASD DDDNNTTEPK
0701: RVGVVKSVNA KERTASVRWL KPRLTAEEPR EFDKEEIASV YELEVHPDYD YCYGDVVVRL SPVTMALPAS SEATEQDDGH QDAEYHQEAK VHDKEENEVD
0801: TNIPELSWVG NITGLKDGDI EVTWADGMVS TVGPQAIYVV GRDDDESIAA ESEASDAASW ETVDDDNGGA PEEDLGRGSF LEENSDAGNN GENDSGRNGA
0901: LALPLAAVEF VTRMASGIFS RGQKAEDSSS SSLTDDNGLT NSSHERGSFL DDHKPIPSES DSCSFKRFDI SQDPLDHHYL GSDEQKTKER RWFKKVDQDW
1001: KILQNNLPDG IFVRVYEDRM DLLRAVIAGA YGTPYQDGLF FFDFHLPSDY PSVPPSAHYH SGGWRLNPNL YEEGKGLVLN SKPYFNEAGY DKQIGTAEGE
1101: KNSLGYNENA FLLNCKTMMY LMRRPPKDFE ELIKDHFRKR GYYILKACDA YMKGYLIGSL SKDASVIDES CSANSNSVGF KLMLAKIAPK LFSALSEVGA
1201: DCNEFKHLQQ QQ
0101: SRKRGFSAVV GIPAVVDPVG APSECLLLKN MFDPSTETEP EFDFDEHIKE DVKDECSKFG ELNHIFVDKN SIGFLSTCHL KMRKQQWECN MLSMMEHEQD
0201: DPGVDLPLDG SLESEPICDD PSRIDKADDS GSNEHPNIYR HDIVRNNKTG SIGVVSEVAG DSDSESDISD EENDGDDDED DDNDDDDGAE EEGKNANEEN
0301: VGRGEKNYKC GTLEGDQIRV LWMDDTEPVQ DVNNVTVVDR GFLHGDYVAS SSDPTGQVGV VVDVDMSVDL LALDGSTHKD ISTKELKRVR DFCVGDYVVH
0401: GPWLGRIDDV LDNVTVLFDD GSMCRVLRAE PLQLKPVSQS NLEEDANFPY YPGQRVKATS SSVFKSSRWL SGLWKPNRLE GTVTKVTAGS IFVYWIASAG
0501: FGPDSAVSPP EEQSPSNLTL LSSFTHANWQ VGDWGLLPSV NQSATIPLHK HVSKLRLYDS QAKRADREQN KSDLEDELSE EKSEPVGITG EALPKETTVS
0601: STSKEPAHEP WPLHRKKIRK LVIRKDKRVK KKEESFERAL LIVNSRTLVD VAWQDGTVEC RREATTLIPI ETPGDQEFVP EQYVVEKASD DDDNNTTEPK
0701: RVGVVKSVNA KERTASVRWL KPRLTAEEPR EFDKEEIASV YELEVHPDYD YCYGDVVVRL SPVTMALPAS SEATEQDDGH QDAEYHQEAK VHDKEENEVD
0801: TNIPELSWVG NITGLKDGDI EVTWADGMVS TVGPQAIYVV GRDDDESIAA ESEASDAASW ETVDDDNGGA PEEDLGRGSF LEENSDAGNN GENDSGRNGA
0901: LALPLAAVEF VTRMASGIFS RGQKAEDSSS SSLTDDNGLT NSSHERGSFL DDHKPIPSES DSCSFKRFDI SQDPLDHHYL GSDEQKTKER RWFKKVDQDW
1001: KILQNNLPDG IFVRVYEDRM DLLRAVIAGA YGTPYQDGLF FFDFHLPSDY PSVPPSAHYH SGGWRLNPNL YEEGKGLVLN SKPYFNEAGY DKQIGTAEGE
1101: KNSLGYNENA FLLNCKTMMY LMRRPPKDFE ELIKDHFRKR GYYILKACDA YMKGYLIGSL SKDASVIDES CSANSNSVGF KLMLAKIAPK LFSALSEVGA
1201: DCNEFKHLQQ QQ
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.