Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02568 | Sorghum | nucleus | 89.26 | 88.7 |
| Zm00001d008520_P001 | Maize | nucleus | 87.26 | 87.02 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 74.43 | 76.95 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 72.34 | 72.14 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 72.61 | 71.7 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 72.61 | 71.7 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 72.25 | 71.27 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 51.77 | 57.71 |
| CDX72600 | Canola | cytosol | 5.91 | 54.17 |
| Solyc01g111680.2.1 | Tomato | nucleus | 45.22 | 50.1 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 45.13 | 48.44 |
| CDX89761 | Canola | nucleus | 45.59 | 47.85 |
| KRG90672 | Soybean | nucleus | 48.5 | 47.42 |
| AT2G16920.1 | Thale cress | nucleus | 45.86 | 45.73 |
| Zm00001d009007_P001 | Maize | cytosol | 10.19 | 45.71 |
| PGSC0003DMT400015781 | Potato | nucleus | 48.23 | 45.69 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 48.41 | 43.97 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 7.73 | 42.08 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 7.73 | 42.08 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 25.3 | 41.37 |
| Bra017778.1-P | Field mustard | cytosol | 32.3 | 39.66 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 42.77 | 38.78 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 13.1 | 38.61 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 43.04 | 38.05 |
| Zm00001d047959_P001 | Maize | cytosol | 7.64 | 37.67 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 14.65 | 35.78 |
| Zm00001d049101_P001 | Maize | cytosol | 4.73 | 33.33 |
| Zm00001d009513_P003 | Maize | cytosol | 12.01 | 33.25 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 29.66 | 22.64 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.1 | UniProt:A0A1D6MMD1 | InterPro:IPR000608 | InterPro:IPR016135 | ProteinID:ONM30344.1 |
| ProteinID:ONM30346.1 | ProteinID:ONM30348.1 | ProteinID:ONM30350.1 | ProteinID:ONM30355.1 | ProteinID:ONM30357.1 | PFAM:PF00179 |
| PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0008428123 | EnsemblPlantsGene:Zm00001d040036 | EnsemblPlants:Zm00001d040036_P022 | EnsemblPlants:Zm00001d040036_T022 | SEG:seg |
Description
Probable ubiquitin-conjugating enzyme E2 23
Coordinates
chr3:-:23951004..23966327
Molecular Weight (calculated)
121485.0 Da
IEP (calculated)
4.365
GRAVY (calculated)
-0.472
Length
1099 amino acids
Sequence
(BLAST)
(BLAST)
0001: METLPNGSVN NAELNQENEK SMYASESEEA RDIFVYREDV VSLKSKEDVR GVVLEVAGEY DYDGSITDDD IDTEEHEDKT AYGAENGVAD GGNVSNGAEV
0101: ESQSSLPDNK VRVLWIDGSE KTEDIDEVVV VDRSFLHGDF IASASDPTGQ MGLVLDVNLV VDLQGANGDM IKGVSSKELG RIREFNVGDY VVSGLWLGRV
0201: DGVLDNVYVS FDDGSVCKVN RADPKCLKPA AGPIHPDTAC PFYPGQRVKA SSSSVFKTCR WLNGFWRASR LEGTITKVES VAVLVYWIAS AHFATDQQSV
0301: PLEEQNPEDL TLLSRFSYTN WQLTDWCLSQ RYTSCTNDTM IDSDKHTWQI CTCSENSVPL SGIPESQADA QIDTDTGHRQ TDVDSTADVL SMSDGDNSCI
0401: AKESETGTSA SSISNEGPQD NATSRKKFRK VFFKKDKRTK KRDDNFERAL LIANTCTKVD VIWQDGTKEC GVAATALIPI HSPNEHEFFP EQYVVDKVTN
0501: DVGVDDSSEP RRVGLVRGVN AKDRTATVSW FKPPLHPEEP KEIACNEIVS VYELDVHPDY DYCYGDIVVR LPPVKPVIES TNSKEQMELD KTLDSSEGFA
0601: ASYSAPPDTS ADEQLSQKES CLQFTSLSWA GNIVGFQDGE IEVIWGDGSI SKVGPHEIYV VGREDDGASL DDGTASDGSS WETVDDNEMD VLHDSAKGDS
0701: QNVPENSIGR ENGSFSSQDG SSVATGPLSV AFEFVTRLAS DLFARGRRHL DGSSDAMDEV ESHWSNEISE IGDDIDKCNK NHVESPEHAA VIENDSSVEK
0801: SVDVVMADNP VHSECFKHFD VLQCPLDHHY LENTTQGTGG KKWVKKVQQE WSILEKNLPD YIYVRVFEDR MDLLRAVIVG ASGTPYQDGL FFFDFHLPLE
0901: YPLVPPSAYY HSGGLRVNPN LYVDGKVCLS LLNTWTGRGN EVWDPSSSSI LQVLVSLQGL VLNEKPYFNE AGYEKQVGTV EGEKNAVPYN ENTYLLSVKS
1001: MLYILRRPPL HFEDFVKSHF RKRGHYILKA CHAYLQGNVV GTLTDDACTT DRSKEHSSSV GFKLVLAKIL PRLITALKDT GADCDQYEHL GRTETVTES
0101: ESQSSLPDNK VRVLWIDGSE KTEDIDEVVV VDRSFLHGDF IASASDPTGQ MGLVLDVNLV VDLQGANGDM IKGVSSKELG RIREFNVGDY VVSGLWLGRV
0201: DGVLDNVYVS FDDGSVCKVN RADPKCLKPA AGPIHPDTAC PFYPGQRVKA SSSSVFKTCR WLNGFWRASR LEGTITKVES VAVLVYWIAS AHFATDQQSV
0301: PLEEQNPEDL TLLSRFSYTN WQLTDWCLSQ RYTSCTNDTM IDSDKHTWQI CTCSENSVPL SGIPESQADA QIDTDTGHRQ TDVDSTADVL SMSDGDNSCI
0401: AKESETGTSA SSISNEGPQD NATSRKKFRK VFFKKDKRTK KRDDNFERAL LIANTCTKVD VIWQDGTKEC GVAATALIPI HSPNEHEFFP EQYVVDKVTN
0501: DVGVDDSSEP RRVGLVRGVN AKDRTATVSW FKPPLHPEEP KEIACNEIVS VYELDVHPDY DYCYGDIVVR LPPVKPVIES TNSKEQMELD KTLDSSEGFA
0601: ASYSAPPDTS ADEQLSQKES CLQFTSLSWA GNIVGFQDGE IEVIWGDGSI SKVGPHEIYV VGREDDGASL DDGTASDGSS WETVDDNEMD VLHDSAKGDS
0701: QNVPENSIGR ENGSFSSQDG SSVATGPLSV AFEFVTRLAS DLFARGRRHL DGSSDAMDEV ESHWSNEISE IGDDIDKCNK NHVESPEHAA VIENDSSVEK
0801: SVDVVMADNP VHSECFKHFD VLQCPLDHHY LENTTQGTGG KKWVKKVQQE WSILEKNLPD YIYVRVFEDR MDLLRAVIVG ASGTPYQDGL FFFDFHLPLE
0901: YPLVPPSAYY HSGGLRVNPN LYVDGKVCLS LLNTWTGRGN EVWDPSSSSI LQVLVSLQGL VLNEKPYFNE AGYEKQVGTV EGEKNAVPYN ENTYLLSVKS
1001: MLYILRRPPL HFEDFVKSHF RKRGHYILKA CHAYLQGNVV GTLTDDACTT DRSKEHSSSV GFKLVLAKIL PRLITALKDT GADCDQYEHL GRTETVTES
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.