Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 97.52 | 97.52 |
| Zm00001d049101_P001 | Maize | cytosol | 67.82 | 87.82 |
| Zm00001d047959_P001 | Maize | cytosol | 92.08 | 83.41 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 40.59 | 63.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 39.6 | 61.54 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 56.93 | 57.5 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 43.56 | 54.66 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 94.55 | 51.21 |
| Bra036393.1-P | Field mustard | cytosol, extracellular | 21.29 | 50.59 |
| KXG31477 | Sorghum | mitochondrion, plastid | 77.72 | 42.66 |
| Zm00001d009007_P001 | Maize | cytosol | 47.03 | 38.78 |
| CDY30673 | Canola | nucleus | 34.65 | 38.67 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 67.82 | 36.63 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 66.83 | 35.81 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 66.83 | 35.71 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 66.83 | 33.92 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 60.89 | 33.52 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 59.9 | 32.97 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 59.9 | 32.88 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 59.9 | 32.88 |
| Os01t0233900-01 | Rice | mitochondrion | 62.87 | 27.31 |
| KRH26136 | Soybean | cytosol | 40.59 | 26.97 |
| AT1G53023.1 | Thale cress | cytosol | 40.1 | 25.63 |
| Bra041020.1-P | Field mustard | plastid | 37.62 | 23.1 |
| Bra038095.1-P | Field mustard | cytosol, nucleus, peroxisome | 36.63 | 22.77 |
| CDY25884 | Canola | plastid | 36.14 | 22.05 |
| CDY51802 | Canola | cytosol | 22.28 | 21.95 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 48.02 | 21.56 |
| KRH26135 | Soybean | cytosol | 40.59 | 21.08 |
| CDY25883 | Canola | cytosol | 29.21 | 20.85 |
| GSMUA_Achr10P... | Banana | nucleus | 47.03 | 19.96 |
| PGSC0003DMT400047166 | Potato | nucleus | 45.54 | 19.91 |
| Solyc07g053960.2.1 | Tomato | nucleus | 45.54 | 19.87 |
| KRH58633 | Soybean | cytosol, nucleus | 44.06 | 19.87 |
| CDX71178 | Canola | cytosol | 41.58 | 19.49 |
| KRH42541 | Soybean | nucleus | 44.06 | 18.78 |
| Zm00001d009513_P003 | Maize | cytosol | 36.63 | 18.64 |
| CDY55875 | Canola | nucleus | 38.12 | 18.03 |
| CDX82439 | Canola | cytosol | 40.59 | 17.86 |
| CDY02528 | Canola | cytosol | 42.08 | 17.71 |
| Bra030965.1-P | Field mustard | nucleus | 41.09 | 17.66 |
| CDY47562 | Canola | cytosol | 42.08 | 17.63 |
| Bra040814.1-P | Field mustard | cytosol | 40.59 | 17.63 |
| CDY25886 | Canola | cytosol | 40.59 | 17.63 |
| VIT_12s0028g03630.t01 | Wine grape | nucleus | 44.06 | 17.42 |
| CDX75824 | Canola | cytosol | 38.12 | 16.49 |
| CDY24125 | Canola | cytosol | 39.6 | 16.46 |
| Bra019007.1-P | Field mustard | cytosol | 39.11 | 15.9 |
| CDX98552 | Canola | cytosol | 42.08 | 15.62 |
| CDY26018 | Canola | cytosol | 39.11 | 15.55 |
| Bra001591.1-P | Field mustard | nucleus | 41.09 | 15.4 |
| CDX97660 | Canola | cytosol | 42.08 | 15.4 |
| Bra027252.1-P | Field mustard | cytosol | 41.58 | 15.27 |
| AT1G53025.2 | Thale cress | nucleus | 41.58 | 15.08 |
| AT3G15355.1 | Thale cress | nucleus | 43.07 | 14.29 |
| Bra021105.1-P | Field mustard | nucleus | 42.08 | 14.24 |
| CDY20117 | Canola | nucleus | 42.08 | 14.21 |
| Solyc10g007000.2.1 | Tomato | cytosol | 43.56 | 13.19 |
| CDY21838 | Canola | cytosol | 42.08 | 13.1 |
| KRH27240 | Soybean | cytosol | 45.54 | 13.07 |
| KRH22096 | Soybean | cytosol | 46.04 | 12.86 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 46.04 | 12.4 |
| PGSC0003DMT400064440 | Potato | nucleus | 44.55 | 12.36 |
| PGSC0003DMT400039746 | Potato | nucleus | 44.06 | 12.28 |
| Solyc12g013820.1.1 | Tomato | nucleus | 43.07 | 11.73 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 40.1 | 9.32 |
| Zm00001d040036_P022 | Maize | nucleus | 42.08 | 7.73 |
| Zm00001d008520_P001 | Maize | nucleus | 42.08 | 7.71 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 44.06 | 6.18 |
Protein Annotations
| EnsemblPlants:Zm00001d015028_P001 | EnsemblPlants:Zm00001d015028_T001 | EnsemblPlantsGene:Zm00001d015028 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF1 | PFAM:PF00179 | ProteinID:AQK67914.1 |
| SEG:seg | SUPFAM:SSF54495 | UniParc:UPI000844B837 | UniProt:A0A1D6GYT0 | MapMan:35.1 | : |
Description
Probable ubiquitin-conjugating enzyme E2 25
Coordinates
chr5:+:72769515..72772187
Molecular Weight (calculated)
22938.4 Da
IEP (calculated)
8.555
GRAVY (calculated)
-0.386
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCVQKVYYH SGGLRLNPNL YESGKVCLSL LNTWWGKGCE KWGKSSSTML QVLVSIQGLV LNDRPYFNEP GYKNSAETTG GERCSLAYNQ TTFVRSCKTT
101: LYSLRKPPMH FETLVLWHFH EHERAILDAC RAYMSGTVVG SSAGTGSNRR YVHDKCFAEF HKSLTLYTEH LRAEFATNRR RVMELETEDE IVPSIAASMK
201: SC
101: LYSLRKPPMH FETLVLWHFH EHERAILDAC RAYMSGTVVG SSAGTGSNRR YVHDKCFAEF HKSLTLYTEH LRAEFATNRR RVMELETEDE IVPSIAASMK
201: SC
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.