Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027252.1-P | Field mustard | cytosol | 98.01 | 98.36 |
| CDX98552 | Canola | cytosol | 94.93 | 96.32 |
| CDX82439 | Canola | cytosol | 58.51 | 70.37 |
| CDY20117 | Canola | nucleus | 75.54 | 69.73 |
| CDY51802 | Canola | cytosol | 25.18 | 67.8 |
| CDY30673 | Canola | nucleus | 22.1 | 67.4 |
| CDX75824 | Canola | cytosol | 55.62 | 65.74 |
| CDY21838 | Canola | cytosol | 76.63 | 65.18 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 17.39 | 59.63 |
| CDY25883 | Canola | cytosol | 29.89 | 58.3 |
| AT3G15355.1 | Thale cress | nucleus | 63.22 | 57.31 |
| CDY25884 | Canola | plastid | 32.07 | 53.47 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 19.2 | 53.0 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 28.08 | 51.84 |
| CDX71178 | Canola | cytosol | 40.4 | 51.74 |
| CDY55875 | Canola | nucleus | 38.95 | 50.35 |
| KRH26136 | Soybean | cytosol | 26.99 | 49.01 |
| CDY24125 | Canola | cytosol | 43.12 | 48.97 |
| CDY26018 | Canola | cytosol | 44.57 | 48.43 |
| CDY25886 | Canola | cytosol | 39.49 | 46.88 |
| Zm00001d009007_P001 | Maize | cytosol | 20.65 | 46.53 |
| CDY02528 | Canola | cytosol | 40.4 | 46.46 |
| CDY47562 | Canola | cytosol | 40.22 | 46.06 |
| Os01t0677500-00 | Rice | cytosol | 28.62 | 45.8 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 27.17 | 43.86 |
| KRH26135 | Soybean | cytosol | 30.43 | 43.19 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 15.58 | 42.57 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 9.96 | 42.31 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 15.4 | 42.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 9.78 | 41.54 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 28.26 | 41.27 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 27.9 | 41.18 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 28.08 | 41.11 |
| KXG31477 | Sorghum | mitochondrion, plastid | 26.81 | 40.22 |
| Zm00001d009513_P003 | Maize | cytosol | 28.8 | 40.05 |
| Os09t0294300-01 | Rice | nucleus | 30.8 | 39.26 |
| EES17914 | Sorghum | plastid | 32.61 | 39.13 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 25.72 | 38.69 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 27.72 | 38.44 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 25.54 | 38.42 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 25.91 | 38.34 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 25.54 | 38.32 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 31.7 | 38.21 |
| Os05t0232500-01 | Rice | nucleus, plastid | 32.25 | 38.12 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 31.16 | 38.05 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 25.36 | 38.04 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 30.98 | 38.0 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 30.98 | 37.92 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 31.16 | 37.89 |
| Zm00001d047959_P001 | Maize | cytosol | 15.22 | 37.67 |
| KXG31481 | Sorghum | nucleus | 31.16 | 37.47 |
| GSMUA_Achr10P... | Banana | nucleus | 32.07 | 37.18 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 30.43 | 37.09 |
| HORVU1Hr1G029800.11 | Barley | plastid | 31.88 | 36.9 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 30.07 | 36.64 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 32.43 | 36.31 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 34.96 | 35.94 |
| Os05t0557600-01 | Rice | cytosol | 32.97 | 35.76 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 30.98 | 35.62 |
| Zm00001d049101_P001 | Maize | cytosol | 9.96 | 35.26 |
| Os01t0232500-01 | Rice | nucleus | 30.62 | 34.85 |
| TraesCS1B01G146400.2 | Wheat | plastid | 32.61 | 34.68 |
| TraesCS1D01G125200.2 | Wheat | plastid | 32.61 | 34.55 |
| EES19929 | Sorghum | nucleus | 31.52 | 34.32 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 32.61 | 33.96 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 32.61 | 33.96 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 32.43 | 33.77 |
| KXG33109 | Sorghum | nucleus | 32.25 | 33.33 |
| Os01t0233900-01 | Rice | mitochondrion | 27.17 | 32.26 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 32.43 | 31.91 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 32.25 | 31.73 |
| CDX72600 | Canola | cytosol | 6.88 | 31.67 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 32.07 | 31.66 |
| Solyc10g007000.2.1 | Tomato | cytosol | 37.68 | 31.18 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 32.61 | 31.09 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 41.67 | 30.67 |
| HORVU3Hr1G062370.3 | Barley | golgi | 32.61 | 30.56 |
| KRH27240 | Soybean | cytosol | 38.95 | 30.54 |
| KRH22096 | Soybean | cytosol | 38.22 | 29.18 |
| PGSC0003DMT400064440 | Potato | nucleus | 38.41 | 29.12 |
| PGSC0003DMT400039746 | Potato | nucleus | 38.04 | 28.97 |
| Solyc12g013820.1.1 | Tomato | nucleus | 38.22 | 28.44 |
| Os01t0229900-01 | Rice | mitochondrion | 13.41 | 27.21 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 34.78 | 22.09 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 26.63 | 21.88 |
| CDY53783 | Canola | nucleus | 28.62 | 18.65 |
| CDY37693 | Canola | nucleus | 28.44 | 18.15 |
| CDX89761 | Canola | nucleus | 27.72 | 14.61 |
| Os03t0679300-01 | Rice | mitochondrion | 3.99 | 13.25 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 24.28 | 11.06 |
Protein Annotations
| EnsemblPlants:CDX97660 | EnsemblPlantsGene:GSBRNA2T00104895001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX97660 |
| ProteinID:CDX97660.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EE49F6 | MapMan:35.1 |
Description
BnaA05g24190D
Coordinates
chrLK031900:+:826071..828880
Molecular Weight (calculated)
60791.7 Da
IEP (calculated)
4.567
GRAVY (calculated)
-0.508
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEIAHPVA SCSITLTPNK APTSDANGVE EQYEMQNGGG VVDNKNKGKA IQLESPSDDE QLEGSASDSY DATNNNGSTP LSDSLLNPDS LVYEDDDDYS
101: DHYAYEIEDE IEDDHADDYV SEYQALFDAK EKEIPAGVEV AMDWLPSSET AKPSGSSSSS SKKATTGSGI YLTPNNAYAL PQKIHGFHYS GPALKYSSTH
201: LGPKTDPGTV MEAPAPAPAP ASSGLSLQMS KKNPGYLGFA STRPHVEEVI SAASSYTVKR NVEDYLGKYL FFKKFDIVED LVDHHYAAKG TASKQHSKEW
301: TKRIQEEWKI LEKDLPEQTI FVRAYESRMD LLRAVIVGAD GTPYHDGLFF FDIFFPDTYP SGPPMVHYHS GGLRINPNLY NSGKVCLSLL GTWSGVQTEK
401: WIPNESTMLQ VLVSIQGLIL NQKPFFNEPG YERLAGSPSG ECQSNAYSEK IFLLSLKTMV YNMRRPPKYF EDFAYGHFLS SAHDVLKACN AYRNGAPVAS
501: LVRGNVKGGE ESSERCSESF KKDVGAFVDT LLLKEFILLG VLGLEPEEKE ED
101: DHYAYEIEDE IEDDHADDYV SEYQALFDAK EKEIPAGVEV AMDWLPSSET AKPSGSSSSS SKKATTGSGI YLTPNNAYAL PQKIHGFHYS GPALKYSSTH
201: LGPKTDPGTV MEAPAPAPAP ASSGLSLQMS KKNPGYLGFA STRPHVEEVI SAASSYTVKR NVEDYLGKYL FFKKFDIVED LVDHHYAAKG TASKQHSKEW
301: TKRIQEEWKI LEKDLPEQTI FVRAYESRMD LLRAVIVGAD GTPYHDGLFF FDIFFPDTYP SGPPMVHYHS GGLRINPNLY NSGKVCLSLL GTWSGVQTEK
401: WIPNESTMLQ VLVSIQGLIL NQKPFFNEPG YERLAGSPSG ECQSNAYSEK IFLLSLKTMV YNMRRPPKYF EDFAYGHFLS SAHDVLKACN AYRNGAPVAS
501: LVRGNVKGGE ESSERCSESF KKDVGAFVDT LLLKEFILLG VLGLEPEEKE ED
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.