Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P25120_001 | Banana | cytosol | 39.04 | 51.84 |
| CDY51802 | Canola | cytosol | 26.7 | 51.71 |
| CDY30673 | Canola | nucleus | 22.92 | 50.28 |
| Os05t0557600-01 | Rice | cytosol | 63.22 | 49.31 |
| EES19929 | Sorghum | nucleus | 57.18 | 44.77 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 49.87 | 43.23 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 60.2 | 42.75 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 60.2 | 42.6 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 59.7 | 42.25 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 60.71 | 41.62 |
| CDY25883 | Canola | cytosol | 29.47 | 41.34 |
| Zm00001d009007_P001 | Maize | cytosol | 25.44 | 41.22 |
| Bra036393.1-P | Field mustard | cytosol, extracellular | 8.82 | 41.18 |
| Bra041020.1-P | Field mustard | plastid | 33.0 | 39.82 |
| KRH26136 | Soybean | cytosol | 30.48 | 39.8 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 53.4 | 39.48 |
| Bra038095.1-P | Field mustard | cytosol, nucleus, peroxisome | 32.24 | 39.38 |
| AT1G53023.1 | Thale cress | cytosol | 31.23 | 39.24 |
| CDY25884 | Canola | plastid | 31.74 | 38.07 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 18.64 | 36.63 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 18.64 | 36.63 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 40.81 | 36.0 |
| PGSC0003DMT400047166 | Potato | nucleus | 40.81 | 35.06 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 32.75 | 34.85 |
| Solyc07g053960.2.1 | Tomato | nucleus | 40.55 | 34.77 |
| KRH26135 | Soybean | cytosol | 34.01 | 34.7 |
| Zm00001d047959_P001 | Maize | cytosol | 19.4 | 34.53 |
| KRH58633 | Soybean | cytosol, nucleus | 38.29 | 33.93 |
| CDX71178 | Canola | cytosol | 35.77 | 32.95 |
| VIT_12s0028g03630.t01 | Wine grape | nucleus | 42.32 | 32.88 |
| CDX75824 | Canola | cytosol | 38.54 | 32.76 |
| CDX82439 | Canola | cytosol | 37.53 | 32.46 |
| CDY55875 | Canola | nucleus | 34.76 | 32.32 |
| KRH42541 | Soybean | nucleus | 38.29 | 32.07 |
| CDY24125 | Canola | cytosol | 37.53 | 30.66 |
| Bra040814.1-P | Field mustard | cytosol | 35.52 | 30.32 |
| CDY25886 | Canola | cytosol | 35.52 | 30.32 |
| Bra030965.1-P | Field mustard | nucleus | 35.77 | 30.21 |
| Bra019007.1-P | Field mustard | cytosol | 37.53 | 29.98 |
| CDX98552 | Canola | cytosol | 40.81 | 29.78 |
| Bra001591.1-P | Field mustard | nucleus | 40.3 | 29.68 |
| CDY47562 | Canola | cytosol | 36.02 | 29.67 |
| CDY02528 | Canola | cytosol | 35.77 | 29.58 |
| CDY26018 | Canola | cytosol | 37.53 | 29.33 |
| Bra027252.1-P | Field mustard | cytosol | 40.3 | 29.09 |
| CDX97660 | Canola | cytosol | 40.05 | 28.8 |
| Zm00001d049101_P001 | Maize | cytosol | 10.83 | 27.56 |
| Bra021105.1-P | Field mustard | nucleus | 41.06 | 27.3 |
| AT1G53025.2 | Thale cress | nucleus | 38.29 | 27.29 |
| CDY20117 | Canola | nucleus | 41.06 | 27.26 |
| AT3G15355.1 | Thale cress | nucleus | 41.06 | 26.77 |
| Solyc10g007000.2.1 | Tomato | cytosol | 42.32 | 25.19 |
| CDY21838 | Canola | cytosol | 41.06 | 25.12 |
| KRH27240 | Soybean | cytosol | 43.83 | 24.72 |
| KRH22096 | Soybean | cytosol | 44.08 | 24.2 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 44.58 | 23.6 |
| PGSC0003DMT400064440 | Potato | nucleus | 41.56 | 22.66 |
| PGSC0003DMT400039746 | Potato | nucleus | 40.05 | 21.93 |
| Solyc12g013820.1.1 | Tomato | nucleus | 39.8 | 21.29 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 38.04 | 17.38 |
| Zm00001d008520_P001 | Maize | nucleus | 33.5 | 12.07 |
| Zm00001d040036_P022 | Maize | nucleus | 33.25 | 12.01 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 33.25 | 9.17 |
Protein Annotations
| EnsemblPlants:Zm00001d009513_P003 | EnsemblPlants:Zm00001d009513_T003 | EnsemblPlantsGene:Zm00001d009513 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF6 | PFAM:PF00179 | PFscan:PS50127 |
| ProteinID:AQK92030.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI000843D00B | UniProt:A0A1D6FJU1 |
| MapMan:35.1 | : | : | : | : | : |
Description
Probable ubiquitin-conjugating enzyme E2 25
Coordinates
chr8:-:68444917..68451485
Molecular Weight (calculated)
45337.1 Da
IEP (calculated)
5.078
GRAVY (calculated)
-0.332
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVPQEVIE IDDDDPDGVI IIGDKAPLDK NKQTVVCPMD WPKHAKSGWV QDIAGPSTYA SKYIDSCVDL KVFQDEAVYN YSDDCPYAGF EDYMYDEDEF
101: EVDGYDALLI ESEFKFGLSA KFDNLHAPPV LEVSLPWMQK TAIDIANKTK PTKVVDDKIE EKYKAFKRFD TVDDHSDHYY SKPTSRKVQV VKKFSSVLKK
201: LFSQPSKDWV KRIQHEWKVL ERDLPDTIFV RAYEDRMDLL RGVIMGPAGT PYHDGLFFFD IYFPPRYPNV PPMVNYRAGG LRLNPNLYDC GKVCLSLLNT
301: WDGSGCEKWN PANSTMLQVL VSIQALVLNA KPFFNEPGYA MHANTAHGEK KSLAYNEDTF LLSCRTMLYS LRNPPKVYAH VIVLVMGEIL LAFRSPI
101: EVDGYDALLI ESEFKFGLSA KFDNLHAPPV LEVSLPWMQK TAIDIANKTK PTKVVDDKIE EKYKAFKRFD TVDDHSDHYY SKPTSRKVQV VKKFSSVLKK
201: LFSQPSKDWV KRIQHEWKVL ERDLPDTIFV RAYEDRMDLL RGVIMGPAGT PYHDGLFFFD IYFPPRYPNV PPMVNYRAGG LRLNPNLYDC GKVCLSLLNT
301: WDGSGCEKWN PANSTMLQVL VSIQALVLNA KPFFNEPGYA MHANTAHGEK KSLAYNEDTF LLSCRTMLYS LRNPPKVYAH VIVLVMGEIL LAFRSPI
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.