Factsheet for Bra038095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51802	Canola	cytosol	61.85	98.05
CDY25883	Canola	cytosol	85.23	97.88
Bra041020.1-P	Field mustard	plastid	75.69	74.77
Bra036393.1-P	Field mustard	cytosol, extracellular	18.15	69.41
AT1G53023.1	Thale cress	cytosol	58.77	60.44
Bra040814.1-P	Field mustard	cytosol	80.62	56.34
HORVU3Hr1G109730.1	Barley	cytosol	27.69	55.9
Bra030965.1-P	Field mustard	nucleus	76.0	52.55
HORVU1Hr1G090980.2	Barley	cytosol	31.08	50.5
Bra019007.1-P	Field mustard	cytosol	76.31	49.9
KRH26136	Soybean	cytosol	43.38	46.38
GSMUA_Achr7P25120_001	Banana	cytosol	42.46	46.15
Zm00001d009007_P001	Maize	cytosol	32.92	43.67
AT1G53025.2	Thale cress	nucleus	71.08	41.47
KRH26135	Soybean	cytosol	47.69	39.85
HORVU2Hr1G062530.3	Barley	cytosol	15.38	38.46
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	39.69	37.72
HORVU5Hr1G000190.3	Barley	cytosol	15.08	37.69
Os01t0677500-00	Rice	cytosol	40.0	37.68
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	23.08	37.13
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	22.77	36.63
KXG31477	Sorghum	mitochondrion, plastid	40.31	35.6
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	40.62	35.29
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	40.31	34.75
Bra001591.1-P	Field mustard	nucleus	57.54	34.69
TraesCS3B01G183800.2	Wheat	nucleus	39.08	34.51
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	40.0	34.39
TraesCS3A01G157300.2	Wheat	nucleus	38.77	34.33
HORVU3Hr1G031950.4	Barley	mitochondrion	38.77	34.33
TraesCS3D01G164900.3	Wheat	nucleus	38.46	33.97
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	38.77	33.78
Bra027252.1-P	Field mustard	cytosol	56.92	33.64
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	40.62	33.17
Zm00001d047959_P001	Maize	cytosol	22.46	32.74
Os09t0294300-01	Rice	nucleus	43.38	32.56
Zm00001d009513_P003	Maize	cytosol	39.38	32.24
TraesCS3D01G164200.1	Wheat	nucleus, plastid	44.31	31.93
Zm00001d039285_P001	Maize	cytosol, plastid	44.0	31.78
TraesCS3A01G156300.1	Wheat	nucleus, plastid	44.31	31.72
TraesCS3B01G183000.1	Wheat	nucleus, plastid	44.0	31.64
GSMUA_Achr6P22670_001	Banana	cytosol	44.31	31.44
KXG31481	Sorghum	nucleus	44.31	31.37
Bra021105.1-P	Field mustard	nucleus	56.62	30.82
Zm00001d049101_P001	Maize	cytosol	14.46	30.13
Os05t0557600-01	Rice	cytosol	47.08	30.06
Os05t0232500-01	Rice	nucleus, plastid	43.08	29.98
EES17914	Sorghum	plastid	41.85	29.57
GSMUA_Achr10P...	Banana	nucleus	42.77	29.2
Os01t0232500-01	Rice	nucleus	43.38	29.07
EES19929	Sorghum	nucleus	45.23	28.99
HORVU3Hr1G031730.4	Barley	nucleus, plastid	42.77	28.96
TraesCS5D01G272400.1	Wheat	nucleus	40.31	28.92
TraesCS5B01G264000.1	Wheat	nucleus	40.31	28.92
Os01t0233900-01	Rice	mitochondrion	41.23	28.82
GSMUA_Achr9P00210_001	Banana	plastid	46.46	28.12
TraesCS3B01G303300.1	Wheat	nucleus	45.23	27.74
TraesCS3D01G269000.1	Wheat	nucleus	45.23	27.74
TraesCS3A01G269200.1	Wheat	nucleus	45.23	27.74
HORVU1Hr1G029800.11	Barley	plastid	40.62	27.67
TraesCS1B01G415500.2	Wheat	nucleus	47.08	27.27
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	46.77	27.19
TraesCS1A01G129500.2	Wheat	nucleus	41.23	27.18
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	46.46	26.92
KXG33109	Sorghum	nucleus	43.38	26.4
TraesCS1B01G146400.2	Wheat	plastid	41.23	25.82
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	45.85	25.73
TraesCS1D01G125200.2	Wheat	plastid	41.23	25.72
HORVU3Hr1G062370.3	Barley	golgi	45.54	25.13
Solyc10g007000.2.1	Tomato	cytosol	50.46	24.59
KRH27240	Soybean	cytosol	52.0	24.01
KRH22096	Soybean	cytosol	51.38	23.1
VIT_19s0014g02760.t01	Wine grape	nucleus	52.31	22.67
PGSC0003DMT400064440	Potato	nucleus	50.77	22.66
Os01t0229900-01	Rice	mitochondrion	18.77	22.43
PGSC0003DMT400039746	Potato	nucleus	47.69	21.38
Solyc12g013820.1.1	Tomato	nucleus	48.31	21.16
KRH55293	Soybean	cytosol, peroxisome, plastid	50.46	18.87
Bra021874.1-P	Field mustard	nucleus	40.0	15.03
Bra017778.1-P	Field mustard	cytosol	39.38	14.3
Bra013040.1-P	Field mustard	cytosol, extracellular, mitochondrion, nucleus	35.38	9.25
Os03t0679300-01	Rice	mitochondrion	4.0	7.83

Protein Annotations

EnsemblPlants:Bra038095.1	EnsemblPlants:Bra038095.1-P	EnsemblPlantsGene:Bra038095	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	PFAM:PF00179	PFscan:PS50127
SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI00025477F9	UniProt:M4FAI1	MapMan:35.1	:

Description

AT1G53020 (E=8e-117) UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase

Coordinates

chrA05:+:10589388..10591055

Molecular Weight (calculated)

37187.7 Da

IEP (calculated)

9.950

GRAVY (calculated)

-0.362

Length

325 amino acids

Sequence
(BLAST)

001: MEPAVDRKAG IPEVIDKKNK GNSILNYQPW WFPNFSSKRT SARANFKRFD SVQHFSDHHY VLKGNASKQH SRTWAKKIQA DWKILEKDLP ETIFVRACES
101: RMDLMRAVII GAEGTPYHDG LFFFDIHFPD TYPSVPPMVH YHSGGLTINP NLYNSGHVCL SLLGTWFGNT RENWLPKEST MLQLLVSIQG LILNRKPYYN
201: EPFVGWTKWT PLGEPFSKGY SENVFILSLR TMVYIMRKPP NHFEEFVRSH YFVRASDIVK AANAYIDGAP VGSIVKGTSQ GGSMKFRTEV AVFMKTVVDE
301: FVKLGVKELQ DKLKPPPVIH TNTSR

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.