Factsheet for TraesCS5B01G264000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	70.86	93.86
TraesCS1B01G146400.2	Wheat	plastid	74.17	64.74
Os05t0232500-01	Rice	nucleus, plastid	63.13	61.24
EES17914	Sorghum	plastid	60.49	59.57
TraesCS3B01G183000.1	Wheat	nucleus, plastid	56.73	56.86
CDY30673	Canola	nucleus	21.41	53.59
Bra036393.1-P	Field mustard	cytosol, extracellular	9.27	49.41
TraesCS7B01G110500.1	Wheat	cytosol, plastid, vacuole	24.72	48.07
CDY51802	Canola	cytosol	21.63	47.8
TraesCS3B01G029300.1	Wheat	peroxisome	22.08	46.51
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	36.42	43.77
KRH26136	Soybean	cytosol	29.14	43.42
AT1G53023.1	Thale cress	cytosol	30.02	43.04
CDY25884	Canola	plastid	30.46	41.69
Bra041020.1-P	Field mustard	plastid	30.24	41.64
GSMUA_Achr10P...	Banana	nucleus	42.6	40.55
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	28.92	40.31
TraesCS3B01G183800.2	Wheat	nucleus	32.45	39.95
CDY25883	Canola	cytosol	24.94	39.93
KRH58633	Soybean	cytosol, nucleus	38.85	39.29
PGSC0003DMT400047166	Potato	nucleus	39.51	38.74
KRH26135	Soybean	cytosol	33.11	38.56
Solyc07g053960.2.1	Tomato	nucleus	39.29	38.44
KRH42541	Soybean	nucleus	38.85	37.13
VIT_12s0028g03630.t01	Wine grape	nucleus	39.07	34.64
CDX71178	Canola	cytosol	32.01	33.64
CDX82439	Canola	cytosol	33.11	32.68
TraesCS1B01G415500.2	Wheat	nucleus	40.4	32.62
CDX75824	Canola	cytosol	33.33	32.33
TraesCS3B01G303300.1	Wheat	nucleus	37.75	32.26
Bra030965.1-P	Field mustard	nucleus	33.33	32.13
CDY55875	Canola	nucleus	30.02	31.85
CDY47562	Canola	cytosol	33.33	31.33
CDY02528	Canola	cytosol	33.11	31.25
CDY24125	Canola	cytosol	32.89	30.66
CDX98552	Canola	cytosol	36.42	30.33
CDX97660	Canola	cytosol	36.64	30.07
Bra001591.1-P	Field mustard	nucleus	35.76	30.06
Bra019007.1-P	Field mustard	cytosol	32.89	29.98
Bra040814.1-P	Field mustard	cytosol	30.68	29.89
CDY25886	Canola	cytosol	30.68	29.89
Bra027252.1-P	Field mustard	cytosol	36.2	29.82
CDY26018	Canola	cytosol	33.11	29.53
AT1G53025.2	Thale cress	nucleus	35.32	28.73
Bra021105.1-P	Field mustard	nucleus	36.87	27.97
CDY20117	Canola	nucleus	36.64	27.76
AT3G15355.1	Thale cress	nucleus	36.64	27.26
CDY21838	Canola	cytosol	36.42	25.42
Solyc10g007000.2.1	Tomato	cytosol	36.64	24.89
KRH27240	Soybean	cytosol	36.87	23.72
KRH22096	Soybean	cytosol	37.53	23.51
PGSC0003DMT400064440	Potato	nucleus	36.64	22.8
VIT_19s0014g02760.t01	Wine grape	nucleus	37.75	22.8
PGSC0003DMT400039746	Potato	nucleus	36.2	22.62
Solyc12g013820.1.1	Tomato	nucleus	36.2	22.1
KRH55293	Soybean	cytosol, peroxisome, plastid	34.44	17.95
TraesCS1B01G415800.1	Wheat	cytosol	32.01	17.18
TraesCS5B01G359000.1	Wheat	cytosol	30.02	15.23
TraesCS2B01G421500.1	Wheat	golgi, mitochondrion, plasma membrane	31.79	14.78
TraesCS3B01G029100.1	Wheat	cytosol, nucleus, plasma membrane	31.57	14.4
TraesCS3B01G029000.1	Wheat	cytosol, nucleus, plasma membrane	30.91	14.14
TraesCS2B01G596800.1	Wheat	cytosol	28.26	13.72
TraesCS2B01G461900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	31.35	13.71
TraesCS3B01G034500.5	Wheat	nucleus	32.23	13.11
TraesCS2B01G590500.1	Wheat	cytosol	8.83	6.53
TraesCS2B01G590700.1	Wheat	cytosol	8.39	5.85

Protein Annotations

EnsemblPlants:TraesCS5B01G264000.1	EnsemblPlantsGene:TraesCS5B01G264000	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF3	PFAM:PF00179	PFscan:PS50127	SEG:seg
SMART:SM00212	SUPFAM:SSF54495	TIGR:cd00195	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:-:448279041..448287122

Molecular Weight (calculated)

51174.0 Da

IEP (calculated)

4.927

GRAVY (calculated)

-0.549

Length

453 amino acids

Sequence
(BLAST)

001: MRCQAVYASA APPMMSSRRE STSLHFLLVI LFPKRSYGYY MSNAGTEAMD LNFVSCEIEE GDSYVYDEDE GCYVNGVEGP DYEFDEIDLY QQLDYKFDDL
101: YLPPGVEASV PLVQKAVTDD GPDNFKSMSE IEDEIGKKYK FFKQFDIIKD FSDHHYASNP VGKTGKEWTK RIQHDWKLLE NNLPASIYVR VSENRMDLLR
201: AVIIGPQGTP YHDGLFFFDA QFTVSYPATP PVVYYHSGGL RLNPNLYDCG TVCLSLLGTW HGNGCENWNS AHSSMLQVLI SIQGLILNEK PYFNEPGYET
301: EVNDANGQSR SLEYNDTAFQ YSCRTMLYSL RRPPQHFEDL VAGHFRERGH AILAACKYYM EGNEVGSVVP DEDDEGKELE NANAEGSSSS NAVKPKKRAG
401: AGRRTPSFNA DTKVLFEELL VEFNLKGADT KKFCVEKSKK TRQKMKKSQP AAA

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.