Factsheet for TraesCS3B01G029300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G110500.1	Wheat	cytosol, plastid, vacuole	69.3	63.95
Os05t0153132-00	Rice	cytosol	62.33	51.15
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	45.12	25.73
TraesCS3B01G183800.2	Wheat	nucleus	42.79	25.0
TraesCS5B01G264000.1	Wheat	nucleus	46.51	22.08
TraesCS3B01G183000.1	Wheat	nucleus, plastid	43.72	20.8
TraesCS3B01G303300.1	Wheat	nucleus	49.77	20.19
TraesCS3D01G015300.1	Wheat	plasma membrane	93.49	19.98
TraesCS3A01G030400.1	Wheat	plasma membrane	90.7	19.56
TraesCS1B01G146400.2	Wheat	plastid	46.98	19.46
TraesCS3B01G029000.1	Wheat	cytosol, nucleus, plasma membrane	84.65	18.38
TraesCS3B01G029100.1	Wheat	cytosol, nucleus, plasma membrane	84.19	18.23
TraesCS1B01G415500.2	Wheat	nucleus	47.44	18.18
TraesCS5B01G359000.1	Wheat	cytosol	68.37	16.46
TraesCS2B01G461900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	76.74	15.93
TraesCS2B01G421500.1	Wheat	golgi, mitochondrion, plasma membrane	71.63	15.81
TraesCS2B01G596800.1	Wheat	cytosol	67.91	15.65
OQU79703	Sorghum	cytosol	57.67	14.37
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	50.7	12.85
TraesCS1B01G415800.1	Wheat	cytosol	49.3	12.56
TraesCS3B01G034500.5	Wheat	nucleus	55.81	10.77
TraesCS2B01G590500.1	Wheat	cytosol	9.77	3.43
TraesCS2B01G590700.1	Wheat	cytosol	9.3	3.08
KRH36075	Soybean	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3B01G029300.1	EnsemblPlantsGene:TraesCS3B01G029300	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44422	PFAM:PF00179	PFscan:PS50127	SEG:seg	SMART:SM00212
SUPFAM:SSF54495	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:13415870..13416517

Molecular Weight (calculated)

24127.7 Da

IEP (calculated)

5.929

GRAVY (calculated)

-0.328

Length

215 amino acids

Sequence
(BLAST)

001: MDLLRMVMVG ASGTPYDHGP FFFDLQLPPS YPDAPPQVYY HSYGLRLNPN LYESGTVCLS LLNTFGGEGT EVWSSTTSSL LQVVVSIQGL VLNDQPYYNE
101: AGYETLADKP EGHRNALPYN ENAYLLTPRT MQHLLRRPPR GFEEFIKEHF RRQGKLLLRT CNVWLQGNVV DDAHATEATR KQPCSNGLRL ALTNVMPNLV
201: AAFTEIGAKG CEEFQ

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.