Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G206600.1 | Wheat | cytosol | 58.4 | 65.67 |
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 52.67 | 64.19 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 56.49 | 63.52 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 51.15 | 62.33 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 53.05 | 60.7 |
| TraesCS2A01G441700.1 | Wheat | cytosol | 56.87 | 59.84 |
| Os01t0677500-00 | Rice | cytosol | 39.31 | 29.86 |
| Os09t0294300-01 | Rice | nucleus | 44.27 | 26.79 |
| Os01t0232500-01 | Rice | nucleus | 43.13 | 23.3 |
| Os01t0233900-01 | Rice | mitochondrion | 40.84 | 23.01 |
| Os05t0557600-01 | Rice | cytosol | 44.66 | 22.99 |
| Os05t0232500-01 | Rice | nucleus, plastid | 40.46 | 22.7 |
| TraesCSU01G013600.1 | Wheat | cytosol | 58.4 | 16.63 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 55.73 | 16.35 |
| OQU79703 | Sorghum | cytosol | 53.82 | 16.34 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 61.07 | 16.31 |
| TraesCS2B01G596800.1 | Wheat | cytosol | 57.25 | 16.08 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 58.4 | 15.71 |
| TraesCS3A01G030400.1 | Wheat | plasma membrane | 59.54 | 15.65 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 57.63 | 15.52 |
| TraesCS3B01G029100.1 | Wheat | cytosol, nucleus, plasma membrane | 58.78 | 15.51 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 59.16 | 15.5 |
| TraesCS2A01G403400.1 | Wheat | cytosol | 58.4 | 15.44 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 57.25 | 15.42 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 59.16 | 15.41 |
| TraesCS3B01G029000.1 | Wheat | cytosol, nucleus, plasma membrane | 57.63 | 15.25 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 58.02 | 15.2 |
| TraesCS3A01G031600.1 | Wheat | cytosol | 57.25 | 15.05 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 46.56 | 14.39 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 56.49 | 14.29 |
| Os01t0229900-01 | Rice | mitochondrion | 14.12 | 13.6 |
| Os05t0557700-01 | Rice | cytosol | 42.75 | 12.79 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 46.95 | 11.57 |
| Os03t0679300-01 | Rice | mitochondrion | 0.38 | 0.6 |
| KRH36075 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.1 | UniProt:A0A0P0WI20 | ProteinID:BAS92331.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0031625 | GO:GO:0061630 | InterPro:IPR000608 | InterPro:IPR016135 | EnsemblPlantsGene:Os05g0153132 |
| EnsemblPlants:Os05t0153132-00 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF6 | SMART:SM00212 |
| SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0003939CF5 | SEG:seg | : |
Description
UBIQUITIN-CONJUGATING ENZYME 36Similar to UBC23 (UBIQUITIN-CONJUGATING ENZYME 23); small conjugating protein ligase/ ubiquitin-protein ligase. (Os05t0153132-00)
Coordinates
chr5:+:3061080..3061868
Molecular Weight (calculated)
27796.8 Da
IEP (calculated)
6.080
GRAVY (calculated)
-0.021
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: DHKPCTRVHL CNAGTIYVRA FEDRMDLLRA AMVGAAGSPY HDGLFLFDLH LPATYPAAPP EVYYHSFGLR VNPNLYPSGT VCLSLLNTFD GEGVEVWSPA
101: RSTLLQVLVS IQGLVLTADP YYNEAGYDAY AGTPGGRRNA ASYAENACLL TLRSALHLLR RPPRGFEGVV GAHFRRRGAH VLAACESYLR GTRVAGDGGD
201: GGGGERTCSA GFRLALRNVV PVLAAAFAEI GVEGCERFGD GELGQCSLTA IDDSAASADA SD
101: RSTLLQVLVS IQGLVLTADP YYNEAGYDAY AGTPGGRRNA ASYAENACLL TLRSALHLLR RPPRGFEGVV GAHFRRRGAH VLAACESYLR GTRVAGDGGD
201: GGGGERTCSA GFRLALRNVV PVLAAAFAEI GVEGCERFGD GELGQCSLTA IDDSAASADA SD
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.