Factsheet for Os01t0232500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009007_P001	Maize	cytosol	35.26	69.8
TraesCS3B01G183000.1	Wheat	nucleus, plastid	64.33	69.03
TraesCS3D01G164200.1	Wheat	nucleus, plastid	64.12	68.96
Zm00001d039285_P001	Maize	cytosol, plastid	63.71	68.67
TraesCS3A01G156300.1	Wheat	nucleus, plastid	64.12	68.5
KXG31481	Sorghum	nucleus	64.54	68.19
Os05t0232500-01	Rice	nucleus, plastid	62.47	64.88
HORVU3Hr1G031730.4	Barley	nucleus, plastid	63.71	64.38
CDY30673	Canola	nucleus	21.24	56.91
Bra036393.1-P	Field mustard	cytosol, extracellular	9.07	51.76
CDY51802	Canola	cytosol	21.86	51.71
Os01t0677500-00	Rice	cytosol	35.26	49.57
KRH26136	Soybean	cytosol	28.45	45.39
GSMUA_Achr10P...	Banana	nucleus	44.12	44.96
AT1G53023.1	Thale cress	cytosol	29.28	44.94
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	29.07	43.38
Os05t0153132-00	Rice	cytosol	23.3	43.13
CDY25883	Canola	cytosol	25.15	43.11
Bra041020.1-P	Field mustard	plastid	29.07	42.86
CDY25884	Canola	plastid	28.87	42.3
Os09t0294300-01	Rice	nucleus	37.53	42.03
Os05t0557600-01	Rice	cytosol	42.27	40.27
KRH58633	Soybean	cytosol, nucleus	36.91	39.96
KRH26135	Soybean	cytosol	31.96	39.85
PGSC0003DMT400047166	Potato	nucleus	37.94	39.83
Solyc07g053960.2.1	Tomato	nucleus	37.73	39.52
KRH42541	Soybean	nucleus	36.91	37.76
CDX71178	Canola	cytosol	31.96	35.96
CDY55875	Canola	nucleus	31.13	35.36
VIT_12s0028g03630.t01	Wine grape	nucleus	36.49	34.64
CDX82439	Canola	cytosol	32.58	34.42
Os01t0233900-01	Rice	mitochondrion	32.99	34.41
Bra030965.1-P	Field mustard	nucleus	32.78	33.83
CDX75824	Canola	cytosol	32.16	33.4
CDY02528	Canola	cytosol	32.58	32.92
Bra040814.1-P	Field mustard	cytosol	31.55	32.9
CDY25886	Canola	cytosol	31.55	32.9
CDY47562	Canola	cytosol	32.37	32.57
CDY24125	Canola	cytosol	32.16	32.1
Bra019007.1-P	Field mustard	cytosol	32.37	31.59
Bra001591.1-P	Field mustard	nucleus	34.85	31.35
CDY26018	Canola	cytosol	32.58	31.1
CDX98552	Canola	cytosol	34.85	31.07
Bra027252.1-P	Field mustard	cytosol	35.05	30.91
CDX97660	Canola	cytosol	34.85	30.62
AT1G53025.2	Thale cress	nucleus	35.05	30.52
Bra021105.1-P	Field mustard	nucleus	34.85	28.31
CDY20117	Canola	nucleus	34.64	28.09
AT3G15355.1	Thale cress	nucleus	35.26	28.08
CDY21838	Canola	cytosol	35.05	26.19
Os01t0229900-01	Rice	mitochondrion	14.64	26.1
Solyc10g007000.2.1	Tomato	cytosol	35.88	26.09
KRH27240	Soybean	cytosol	37.53	25.85
KRH22096	Soybean	cytosol	38.14	25.59
PGSC0003DMT400039746	Potato	nucleus	37.94	25.38
VIT_19s0014g02760.t01	Wine grape	nucleus	38.97	25.2
Solyc12g013820.1.1	Tomato	nucleus	37.73	24.66
PGSC0003DMT400064440	Potato	nucleus	36.7	24.45
Os05t0557700-01	Rice	cytosol	33.81	18.72
KRH55293	Soybean	cytosol, peroxisome, plastid	32.58	18.18
Os01t0125900-01	Rice	extracellular, plasma membrane	34.23	15.62
Os03t0679300-01	Rice	mitochondrion	3.71	10.84

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:4324280	ProteinID:BAD81371.1	ProteinID:BAF04418.1	ProteinID:BAS71187.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625
GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135	EnsemblPlantsGene:Os01g0232500	EnsemblPlants:Os01t0232500-01	PFAM:PF00179
PFscan:PS50127	PANTHER:PTHR44273	PANTHER:PTHR44273:SF7	UniProt:Q5NAY5	SMART:SM00212	SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000049E75D	RefSeq:XP_015621948.1	SEG:seg	:

Description

UBIQUITIN-CONJUGATING ENZYME 42Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os01t0232500-01);Similar to PFU3/UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase. (Os01t0232500-02)

Coordinates

chr1:+:7340717..7345302

Molecular Weight (calculated)

53832.9 Da

IEP (calculated)

4.548

GRAVY (calculated)

-0.619

Length

485 amino acids

Sequence
(BLAST)

001: MDFGYVGVGQ GSSSSSSSAS CRAADVAAWG SSTQQQQKRQ RCQGSSDDQV GLSTSNSLQM SEPEPRDFDN GENEEEDYYL DEDDCIYDDG DGYDYEFDGG
101: DYFNQRLADK FDDLDLPPGV EATVPWLQKI ITNEEQSSSK LTVEDESANK SANKSQLFKQ FDTVKNFSDH HYAATSGDVT KRDWVKRIQH DWKLLEKDLP
201: ASIYVRVAED RMDLLRAAII GPKGTPYHDG LFFFDIQFSN SYPANPPSVY YHSGGLRINP NLYNNGKVCL SLLGTWAGSG CETWNPSQST MLQVLVSIQA
301: LILNEKPYFN EPGYASYANS VSGERIAMEY NDNTFLHSCR TMLYSLRRPP EHFADLVTSH FRERGHTILA ACRYYMEGHK VGSVVPEEKE PEYGDAGAST
401: SSASASAAAA ALKPRPDKVD SVSRRPTFND NLKTLFEELL MEFNVKGADT AKFLAEKVKK SSGATTTAPV GGARYAAEVV DEWMD

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.