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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plasma membrane 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02528 Canola cytosol 97.66 95.62
CDY47562 Canola cytosol 97.45 95.02
Bra036393.1-P Field mustard cytosol, extracellular 14.68 81.18
Bra041020.1-P Field mustard plastid 53.4 76.29
Bra038095.1-P Field mustard cytosol, nucleus, peroxisome 52.55 76.0
Bra019007.1-P Field mustard cytosol 75.96 71.83
AT1G53023.1 Thale cress cytosol 45.53 67.72
Bra040814.1-P Field mustard cytosol 66.17 66.88
AT1G53025.2 Thale cress nucleus 71.28 60.14
HORVU3Hr1G109730.1 Barley cytosol 20.21 59.01
HORVU1Hr1G090980.2 Barley cytosol 23.4 55.0
GSMUA_Achr7P25120_001 Banana cytosol 30.85 48.49
KRH26136 Soybean cytosol 30.64 47.37
Zm00001d009007_P001 Maize cytosol 23.4 44.9
Os01t0677500-00 Rice cytosol 31.49 42.9
HORVU2Hr1G062530.3 Barley cytosol 11.7 42.31
TraesCS5D01G272300.1 Wheat cytosol, nucleus, plastid 30.64 42.11
Zm00001d051483_P001 Maize mitochondrion, nucleus, peroxisome 17.87 41.58
HORVU5Hr1G000190.3 Barley cytosol 11.49 41.54
KRH26135 Soybean cytosol 34.04 41.13
Zm00001d015028_P001 Maize cytosol, mitochondrion, nucleus 17.66 41.09
Bra001591.1-P Field mustard nucleus 47.02 41.0
Bra027252.1-P Field mustard cytosol 47.45 40.55
KXG31477 Sorghum mitochondrion, plastid 31.49 40.22
TraesCS3A01G157200.1 Wheat mitochondrion, nucleus, plastid 31.7 39.84
TraesCS3B01G183600.1 Wheat mitochondrion, nucleus 31.91 39.79
TraesCS3D01G164800.2 Wheat mitochondrion, nucleus, plastid 31.91 39.68
TraesCS3A01G157300.2 Wheat nucleus 30.0 38.42
Bra021105.1-P Field mustard nucleus 48.72 38.36
Zm00001d039280_P005 Maize mitochondrion, nucleus, plastid 30.43 38.34
TraesCS3B01G183800.2 Wheat nucleus 30.0 38.32
HORVU3Hr1G031950.4 Barley mitochondrion 29.79 38.15
Os09t0294300-01 Rice nucleus 35.11 38.11
HORVU3Hr1G031890.10 Barley cytosol, nucleus 32.13 37.94
TraesCS3D01G164900.3 Wheat nucleus 29.57 37.77
GSMUA_Achr6P22670_001 Banana cytosol 35.74 36.68
Zm00001d047959_P001 Maize cytosol 17.23 36.32
Zm00001d009513_P003 Maize cytosol 30.21 35.77
TraesCS3D01G164200.1 Wheat nucleus, plastid 33.62 35.03
Zm00001d039285_P001 Maize cytosol, plastid 33.4 34.89
TraesCS3A01G156300.1 Wheat nucleus, plastid 33.62 34.8
Os05t0557600-01 Rice cytosol 37.66 34.77
TraesCS3B01G183000.1 Wheat nucleus, plastid 33.19 34.51
EES19929 Sorghum nucleus 36.81 34.12
TraesCS5D01G272400.1 Wheat nucleus 32.77 34.0
Zm00001d049101_P001 Maize cytosol 11.28 33.97
EES17914 Sorghum plastid 32.98 33.7
Os05t0232500-01 Rice nucleus, plastid 33.4 33.62
GSMUA_Achr10P... Banana nucleus 34.04 33.61
TraesCS5B01G264000.1 Wheat nucleus 32.13 33.33
KXG31481 Sorghum nucleus 32.55 33.33
GSMUA_Achr9P00210_001 Banana plastid 37.87 33.15
HORVU1Hr1G029800.11 Barley plastid 33.62 33.12
TraesCS1A01G129500.2 Wheat nucleus 34.47 32.86
TraesCS3D01G269000.1 Wheat nucleus 37.02 32.83
TraesCS3A01G269200.1 Wheat nucleus 37.02 32.83
Os01t0232500-01 Rice nucleus 33.83 32.78
TraesCS3B01G303300.1 Wheat nucleus 36.81 32.64
HORVU3Hr1G031730.4 Barley nucleus, plastid 32.98 32.29
Os01t0233900-01 Rice mitochondrion 31.7 32.04
TraesCS1B01G415500.2 Wheat nucleus 38.09 31.91
KXG33109 Sorghum nucleus 36.17 31.84
TraesCS1D01G396000.2 Wheat cytosol, mitochondrion, nucleus 37.66 31.66
TraesCS1A01G388000.1 Wheat cytosol, mitochondrion, nucleus 37.45 31.37
KRH27240 Soybean cytosol 46.81 31.25
TraesCS1D01G125200.2 Wheat plastid 34.47 31.09
TraesCS1B01G146400.2 Wheat plastid 34.26 31.02
HORVU1Hr1G085630.1 Barley cytosol, nucleus 38.09 30.92
Solyc10g007000.2.1 Tomato cytosol 42.55 29.98
HORVU3Hr1G062370.3 Barley golgi 37.45 29.88
KRH22096 Soybean cytosol 45.96 29.88
VIT_19s0014g02760.t01 Wine grape nucleus 47.45 29.73
PGSC0003DMT400064440 Potato nucleus 43.62 28.16
PGSC0003DMT400039746 Potato nucleus 39.36 25.52
Solyc12g013820.1.1 Tomato nucleus 39.36 24.93
Os01t0229900-01 Rice mitochondrion 13.4 23.16
KRH55293 Soybean cytosol, peroxisome, plastid 41.7 22.55
Bra021874.1-P Field mustard nucleus 32.34 17.57
Bra017778.1-P Field mustard cytosol 30.21 15.87
Bra013040.1-P Field mustard cytosol, extracellular, mitochondrion, nucleus 28.09 10.62
Os03t0679300-01 Rice mitochondrion 3.4 9.64
Protein Annotations
EnsemblPlants:Bra030965.1EnsemblPlants:Bra030965.1-PEnsemblPlantsGene:Bra030965Gene3D:3.10.110.10InterPro:IPR000608InterPro:IPR016135
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_enzyme/RWDPANTHER:PTHR44273PANTHER:PTHR44273:SF5PFAM:PF00179PFscan:PS50127
SEG:segSMART:SM00212SUPFAM:SSF54495UniParc:UPI0002545814UniProt:M4EQ94MapMan:35.1
Description
AT1G53020 (E=5e-140) UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase
Coordinates
chrA08:+:1172641..1175001
Molecular Weight (calculated)
51851.3 Da
IEP (calculated)
8.986
GRAVY (calculated)
-0.475
Length
470 amino acids
Sequence
(BLAST)
001: MDPDVMEIDP PPLASASASR TRKPRKVNLE VIDVEQYHVD KMNKGKAIQD GNNPSSHVSN GVMPIDVDSY TVVLNDIPTG VKVVMSTTQP CGFQNYSSKG
101: TSKSSRNSSN PFLATPSSVP QSLDFASLSA SFAQNNQTVS SSAVQPVDSD ASASSSSAEP VPSSQANFLR DFKRFDTVED FSDHHYLSKG KASKQHSKTW
201: LKKVQADWKI LENDLPETIF VRACESRMDL LRAVIIGAEG TPYHDGLFFF DIQFPDSYPS APPKVHYHSG GLRINPNLYN CGKVCLSLLG TWTGNKREKW
301: LPQESTMLQL LVSIQALILN QKPYFNEPGY EPTKGTVSGE AHSKVYSENV FILSLKTMVY SMRKPPKHFE EFVHSHYFVR ALDIVKACNA YKDGAPVGSI
401: LKGGVQGIEE TSQSGSKKFR TDVAAFMKTV VGEFVKLGIK ELEEKPKPPP VVNANTESNT ANRKRSRSSR
Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.