Factsheet for Bra021874.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37693	Canola	nucleus	97.57	97.57
AT2G33770.1	Thale cress	nucleus	84.74	80.82
VIT_00s1927g00020.t01	Wine grape	cytosol, nucleus	19.65	70.54
VIT_00s0265g00070.t01	Wine grape	cytosol	55.38	50.74
PGSC0003DMT400076435	Potato	nucleus	52.14	48.7
KRH20454	Soybean	cytosol, nucleus, peroxisome	52.37	48.55
KRH21442	Soybean	nucleus	51.45	48.42
KRH50043	Soybean	cytosol	51.79	48.33
Bra036393.1-P	Field mustard	cytosol, extracellular	4.74	48.24
Solyc02g078210.2.1	Tomato	cytosol	51.45	48.11
KRH10881	Soybean	nucleus	51.1	47.84
GSMUA_Achr9P06210_001	Banana	cytosol	47.4	45.86
Os05t0557700-01	Rice	cytosol	44.74	44.18
TraesCS1A01G388400.1	Wheat	cytosol	42.54	43.65
HORVU1Hr1G085570.2	Barley	cytosol	42.66	43.57
TraesCS1B01G415800.1	Wheat	cytosol	42.31	43.36
EES19930	Sorghum	cytosol	43.35	43.05
TraesCS1D01G396300.1	Wheat	nucleus	42.43	42.97
Bra041020.1-P	Field mustard	plastid	16.3	42.86
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	15.03	40.0
GSMUA_Achr9P00220_001	Banana	cytosol	19.08	33.33
Bra017778.1-P	Field mustard	cytosol	33.64	32.51
Bra030965.1-P	Field mustard	nucleus	17.57	32.34
Bra040814.1-P	Field mustard	cytosol	16.76	31.18
Bra019007.1-P	Field mustard	cytosol	17.57	30.58
Bra027252.1-P	Field mustard	cytosol	18.03	28.36
Bra001591.1-P	Field mustard	nucleus	17.11	27.46
Bra021105.1-P	Field mustard	nucleus	17.8	25.8
Zm00001d038972_P002	Maize	endoplasmic reticulum, golgi, plastid	42.89	25.76
Bra013040.1-P	Field mustard	cytosol, extracellular, mitochondrion, nucleus	36.99	25.74

Protein Annotations

MapMan:25.3.1.2	Gene3D:3.10.110.10	EnsemblPlantsGene:Bra021874	EnsemblPlants:Bra021874.1	EnsemblPlants:Bra021874.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810
GO:GO:0006817	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0016036	GO:GO:0019538	GO:GO:0044257
GO:GO:0055062	GO:GO:2000185	InterPro:IPR000608	InterPro:IPR016135	UniProt:M4DZC7	PFAM:PF00179
PFscan:PS50127	PANTHER:PTHR44422	PANTHER:PTHR44422:SF2	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00025436E9	SEG:seg	:	:	:

Description

AT2G33770 (E=7e-223) UBC24, ATUBC24, PHO2 | PHO2 (PHOSPHATE 2); ubiquitin-protein ligase

Coordinates

chrA04:-:14971157..14974310

Molecular Weight (calculated)

95772.4 Da

IEP (calculated)

4.594

GRAVY (calculated)

-0.287

Length

865 amino acids

Sequence
(BLAST)

001: MDMNLTDSDW ESSSDSGSSE QEEVEFSYGG RAQDIFSNLE ETIGKIDDFL SFERGFMYGD IVRSAAEPSG QSGRVINVDM SVNLESIHGK VVKEVDTKRL
101: QRLRSISLCY YVINGPWLGR VDKIVERVSV TLDDGSNYEV LVRNQDQLVA VPPNMLEDSQ YTYYPGQRVQ VKLAHAPRST SWLCGNWREN QALGTVCSVE
201: AGLVYVEWVA SIIMGGGDRN LTAPQALQSP ESLTLLPSVS HVSWQLGDWC ILPGAPHCDV EELQKGFSRN MQSSSSDELF VITKTKMKVD VLWQDGGCSM
301: GVDSQQLLPV GAVNAHDFWP EQFVVEKETC NSKRWGVVKV VNAKEQTVKV QWRTLAEKEA SEQMEEVVSA YELLEHPDFG FCYSDVVFSV ATETKHQLTD
401: SDYSGAYCLS SIGVVAGFRN GVVEVKWANG STSEVAPYEI WRMERSEFSN SSTISSASSV QDLSQKIAQS DESSSNHQET GLVNLYSVGE SCNKNVVESS
501: SFFLPKAAIG FITNLASSLF GSHGSTSAIS SHSLCNDTED QSDSEVLVQE ATEPHDISES KSDEVDMDMM VNLPIVGKGI NKTLDSTIVS FKQFDMVTDC
601: SDHHFFSPGK EVAQPPVTKS WVKKVQQEWS NLEADLPNTI YVRVYEERMD LIRAALVGAP GTPYHDGLFF FDIMLPPQYP HEPPMVHYHS GGMRLNPNLY
701: ESGRVCLSLL NTWNGSGTEV WNPGSSSILQ VLLSFQALVL NEKPYFNEAG YDKQLGRAEG EKNSVSYNEN AFLITCKSMI SLLRKPPKHF EVLVKDHFTH
801: RAQHVLAACK AYMEGVPVGS SAKLQESSTT NSTGFKIMLT KLYPKLVEAF SEIGVDCSQG VALEP

Best Arabidopsis Sequence Match ( AT2G33770.1 )
(BLAST)

001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES

Arabidopsis Description

UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.