Factsheet for PGSC0003DMT400076435

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g078210.2.1	Tomato	cytosol	96.22	96.32
VIT_00s1927g00020.t01	Wine grape	cytosol, nucleus	19.01	73.03
VIT_00s0265g00070.t01	Wine grape	cytosol	56.7	55.61
CDY53783	Canola	nucleus	48.16	52.66
KRH20454	Soybean	cytosol, nucleus, peroxisome	52.7	52.3
Bra021874.1-P	Field mustard	nucleus	48.7	52.14
CDY37693	Canola	nucleus	48.7	52.14
KRH21442	Soybean	nucleus	51.4	51.8
KRH50043	Soybean	cytosol	51.73	51.67
KRH10881	Soybean	nucleus	50.43	50.54
AT2G33770.1	Thale cress	nucleus	48.16	49.17
GSMUA_Achr9P06210_001	Banana	cytosol	47.08	48.77
TraesCS1B01G415800.1	Wheat	cytosol	42.66	46.8
HORVU1Hr1G085570.2	Barley	cytosol	42.76	46.75
TraesCS1A01G388400.1	Wheat	cytosol	42.55	46.74
TraesCS1D01G396300.1	Wheat	nucleus	42.55	46.14
Os05t0557700-01	Rice	cytosol	43.41	45.89
EES19930	Sorghum	cytosol	42.44	45.12
PGSC0003DMT400047166	Potato	nucleus	20.19	40.48
PGSC0003DMT400011956	Potato	cytosol	13.17	38.01
GSMUA_Achr9P00220_001	Banana	cytosol	18.36	34.34
PGSC0003DMT400023282	Potato	cytosol	9.5	30.99
PGSC0003DMT400015781	Potato	nucleus	37.26	29.74
Zm00001d038972_P002	Maize	endoplasmic reticulum, golgi, plastid	41.25	26.53
PGSC0003DMT400039746	Potato	nucleus	20.41	26.07
PGSC0003DMT400064440	Potato	nucleus	19.44	24.73

Protein Annotations

EntrezGene:102591333	MapMan:25.3.1.2	Gene3D:3.10.110.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0006817	GO:GO:0006950
GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009987
GO:GO:0009991	GO:GO:0016036	GO:GO:0019538	GO:GO:0044257	GO:GO:0055062	GO:GO:2000185
InterPro:IPR000608	InterPro:IPR016135	UniProt:M1CWR6	PFAM:PF00179	EnsemblPlantsGene:PGSC0003DMG400029724	PGSC:PGSC0003DMG400029724
EnsemblPlants:PGSC0003DMT400076435	PFscan:PS50127	PANTHER:PTHR44422	PANTHER:PTHR44422:SF2	SMART:SM00212	SUPFAM:SSF54495
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI000294C91F	RefSeq:XP_006347038.1	SEG:seg	:

Description

PHO2 [Source:PGSC_GENE;Acc:PGSC0003DMG400029724]

Coordinates

chr2:+:33974644..33983840

Molecular Weight (calculated)

102667.0 Da

IEP (calculated)

4.474

GRAVY (calculated)

-0.338

Length

926 amino acids

Sequence
(BLAST)

001: MDTSLSDFDS FSESSSYDDQ DYVEYLYGGH ACSILSSLEE SIGKIDDFLS FERVFMYGDI VCSEKEPSGQ MGKVVNVEMI VDLESIYGSK IQDVNSKDVV
101: KIRPISVGDY VVMGPWLGKV EKIIDKIKVL FDDGAKSEFS AEGSETLTPI SPDLVEDPQY PFYPGQRVQV QSVSASGSTN WLCGVRSGKR EQGTIYAVEA
201: GVVHVDWIGC GSLGCEKMPS PPTLQDSEKL TLLSCYSHAK WQLGDCCVLP VADSKNIVRK SIQSSPPCGP MEQDRQLNKA SQKSNRSSTF LQVAVISKTR
301: TKVDVLWQDG SVTTGLDSDS VFPVNIVDAH EFWPEQFVLE KGMGDDSSVP SPKRWGVVRC VDAKERTVKV KWTTYSLNEP NNFRVEQSEE IVSAYELMDH
401: PDYSYCLGDA VCKFCEDQVF SLEGKSLSTH MFSETGMDSN TDLKNVDTGK DNLDFPKYDH LSCIGIIVGF KDGDIEVKWA TGVTSMVAPF EIYRIDKCEA
501: AVSITASNAE NAEPSGVEIC SNESQLSKHE EEKGLLKFGG NSESCNESLW DSGSCLVSRT AIGFFSSITS SLFGSLSTSL FGAYQTISEE GQKSRIVDEE
601: EVIELSHLNA GIPTFEDLKA SPEMELEQGQ ETTEGQKDDA LPSSSKLPEH FRQFDVVTDF SDHHFADGAG KAQLSQVRRG WLKKVQQEWS ILERDLPETI
701: YVRIYEERTD LIRAAIIGAP ATPYHDGIFF FDIYLPPDYP HEPPMVYYHS GGLRVNPNLY ESGKVCLSLL NTWAGSGNEV WNPKSSTILQ VLLSLQALVL
801: NEKPYFNEAG YDAQIGKADG EKNSVSYNEN AFLVTWKSML YLLHKPPKHF EALVLEHFGN QWKNILLACK AYMDGAPVGS AFQPKNQDQE PIKGSSTGFK
901: IMLGKLYPKL VEAFSDKGID CSQLSD

Best Arabidopsis Sequence Match ( AT2G33770.1 )
(BLAST)

001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES

Arabidopsis Description

UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.