Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g111680.2.1 | Tomato | nucleus | 83.53 | 97.68 |
| KRG90672 | Soybean | nucleus | 64.74 | 66.81 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 65.95 | 63.22 |
| CDX89761 | Canola | nucleus | 56.21 | 62.27 |
| AT2G16920.1 | Thale cress | nucleus | 58.36 | 61.43 |
| CDX72600 | Canola | cytosol | 5.86 | 56.67 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 48.02 | 56.49 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 53.88 | 51.57 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 54.22 | 50.6 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 45.69 | 49.86 |
| Zm00001d008520_P001 | Maize | nucleus | 46.81 | 49.27 |
| EES02568 | Sorghum | nucleus | 46.72 | 49.01 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 28.1 | 48.51 |
| Bra017778.1-P | Field mustard | cytosol | 37.33 | 48.38 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 42.67 | 48.34 |
| Zm00001d040036_P022 | Maize | nucleus | 45.69 | 48.23 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 45.86 | 47.76 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 45.78 | 47.71 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 45.69 | 47.62 |
| HORVU3Hr1G004520.2 | Barley | nucleus | 45.17 | 47.55 |
| PGSC0003DMT400011956 | Potato | cytosol | 10.52 | 38.01 |
| PGSC0003DMT400076435 | Potato | nucleus | 29.74 | 37.26 |
| PGSC0003DMT400047166 | Potato | nucleus | 14.66 | 36.8 |
| PGSC0003DMT400023282 | Potato | cytosol | 7.5 | 30.63 |
| PGSC0003DMT400064440 | Potato | nucleus | 15.69 | 25.0 |
| PGSC0003DMT400039746 | Potato | nucleus | 14.91 | 23.86 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015781 | EnsemblPlantsGene:PGSC0003DMG400006168 | Gene3D:3.10.110.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD |
| PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | PFAM:PF00179 | PFscan:PS50127 | PGSC:PGSC0003DMG400006168 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI000294E484 | UniProt:M1A6K6 | MapMan:35.1 | : |
Description
Ubiquitin-conjugating enzyme E2 23 [Source:PGSC_GENE;Acc:PGSC0003DMG400006168]
Coordinates
chr1:-:87638813..87648550
Molecular Weight (calculated)
127954.0 Da
IEP (calculated)
4.220
GRAVY (calculated)
-0.576
Length
1160 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAGQHHDAS RNAEPTANAN DNSNLIEGKS LANGASLDPK VRSECKPGEI LRNLENVSYI YRQDVVKNKT DGKIGLVTEV AGDSDSDSSL TDDEDEDEDE
0101: DDGEEDDDDD DDDGGGGPDD DDDGGGGDSN TEDDRDNNEK AEEADDGNKD RSNCTSDPLI ADHVRVLWMD ESESTESINN VIVVDRGFLH GDYVAAASDP
0201: TGQVGLVVDI NISVDLLAHD GSIFKNVSSR ELKRVRGFTV GDYVVLGPWL GRIDDVFDNV TVMFDDGSVC KVMKADPLRL KPVGRNCLED GHFPFYPGQR
0301: VKASSSSVFK NSRWLSGSWK ANRLEGTVTK VTVGSVFIYW IASAGYGPDS STAPAEEQNP KNLKLMSCFS HAIWQLGDWC LLPSSSFALD KQLSKLQLSD
0401: PTKTVSESSQ SLTDGDSEVV NLEESTGNSE CMEIDVESSV DGNCETLEHD SLAESSTCAN SLSLSKESGQ ESWPLHRKKI RKVVVRRDKK ARKKEENFER
0501: ALLIVNTRTS VDVAWQDGKI GGLESTSLIP IESPGDHEFV AEQYVVEKAA DDADDSNDVR RVGVVKSVNA KERTASVRWL KLVTRAEDPK EFDKEEVVSV
0601: YELEGHPDYD YCYGDVVVRL LPVSLPAKVG SVVTSTEESE HLLVPTEAKE DEQKHSKCNE AEAAPSDDTC SQFSDLSWVG NITGLRNGDI EVTWADGMIS
0701: LVGPQAIYVV DRDDDESIAA GSEVGDDVAS WETVEDHERE TLGNVEEELG TTNATDISIE DEDGFMATED SGRNGALSIP LAALGFVTRL ASGIFSRGRK
0801: QTDSSSLDSR SEDEEREGAF AKIFTGDESW SQRSGDLDNS PRLPAAGNGE DHDTMEVTDV IEANLMSEIG NSSEQHDDQT YSFKRFDITT DPYDHHFLGT
0901: SGQNNAGRKW LKKVQQDWNI LQNNLPDGIY VRVYEDHMDL LRAVIVGAYG TPYQDGLFFF DFHLPPEYPD VPPSAYYHSG GWRINPNLYE EGKVCLSLLN
1001: TWTGRGNEVW DPSSSSILQV LVSLQGLVLN SRPYFNEAGY DKQVGTAEGE KNSLSYNENT FLLNCKTMMY LMRKPPKDFE ELIREHFRMR GYYILKACDA
1101: YMKGFLIGSL IKDASVSNNS SANSNSVGFK LMLAKIVPKL FLALKEIGVE CEEFQHLHQL
0101: DDGEEDDDDD DDDGGGGPDD DDDGGGGDSN TEDDRDNNEK AEEADDGNKD RSNCTSDPLI ADHVRVLWMD ESESTESINN VIVVDRGFLH GDYVAAASDP
0201: TGQVGLVVDI NISVDLLAHD GSIFKNVSSR ELKRVRGFTV GDYVVLGPWL GRIDDVFDNV TVMFDDGSVC KVMKADPLRL KPVGRNCLED GHFPFYPGQR
0301: VKASSSSVFK NSRWLSGSWK ANRLEGTVTK VTVGSVFIYW IASAGYGPDS STAPAEEQNP KNLKLMSCFS HAIWQLGDWC LLPSSSFALD KQLSKLQLSD
0401: PTKTVSESSQ SLTDGDSEVV NLEESTGNSE CMEIDVESSV DGNCETLEHD SLAESSTCAN SLSLSKESGQ ESWPLHRKKI RKVVVRRDKK ARKKEENFER
0501: ALLIVNTRTS VDVAWQDGKI GGLESTSLIP IESPGDHEFV AEQYVVEKAA DDADDSNDVR RVGVVKSVNA KERTASVRWL KLVTRAEDPK EFDKEEVVSV
0601: YELEGHPDYD YCYGDVVVRL LPVSLPAKVG SVVTSTEESE HLLVPTEAKE DEQKHSKCNE AEAAPSDDTC SQFSDLSWVG NITGLRNGDI EVTWADGMIS
0701: LVGPQAIYVV DRDDDESIAA GSEVGDDVAS WETVEDHERE TLGNVEEELG TTNATDISIE DEDGFMATED SGRNGALSIP LAALGFVTRL ASGIFSRGRK
0801: QTDSSSLDSR SEDEEREGAF AKIFTGDESW SQRSGDLDNS PRLPAAGNGE DHDTMEVTDV IEANLMSEIG NSSEQHDDQT YSFKRFDITT DPYDHHFLGT
0901: SGQNNAGRKW LKKVQQDWNI LQNNLPDGIY VRVYEDHMDL LRAVIVGAYG TPYQDGLFFF DFHLPPEYPD VPPSAYYHSG GWRINPNLYE EGKVCLSLLN
1001: TWTGRGNEVW DPSSSSILQV LVSLQGLVLN SRPYFNEAGY DKQVGTAEGE KNSLSYNENT FLLNCKTMMY LMRKPPKDFE ELIREHFRMR GYYILKACDA
1101: YMKGFLIGSL IKDASVSNNS SANSNSVGFK LMLAKIVPKL FLALKEIGVE CEEFQHLHQL
0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ
Arabidopsis Description
UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.