Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G047700.3 | Wheat | nucleus | 96.19 | 95.24 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 96.01 | 95.06 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 95.73 | 94.7 |
| Os01t0125900-01 | Rice | extracellular, plasma membrane | 77.13 | 79.96 |
| EES02568 | Sorghum | nucleus | 76.41 | 76.13 |
| Zm00001d008520_P001 | Maize | nucleus | 74.59 | 74.59 |
| Zm00001d040036_P022 | Maize | nucleus | 72.14 | 72.34 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 8.71 | 59.63 |
| GSMUA_Achr1P26360_001 | Banana | nucleus | 52.09 | 58.22 |
| CDX72600 | Canola | cytosol | 6.08 | 55.83 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 9.62 | 53.0 |
| Solyc01g111680.2.1 | Tomato | nucleus | 44.46 | 49.4 |
| GSMUA_Achr8P34010_001 | Banana | cytosol | 45.46 | 48.93 |
| CDX89761 | Canola | nucleus | 45.64 | 48.04 |
| KRG90672 | Soybean | nucleus | 48.09 | 47.15 |
| AT2G16920.1 | Thale cress | nucleus | 46.37 | 46.37 |
| PGSC0003DMT400015781 | Potato | nucleus | 47.55 | 45.17 |
| VIT_03s0038g02570.t01 | Wine grape | nucleus | 48.28 | 43.97 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 5.08 | 43.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 4.99 | 42.31 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 25.05 | 41.07 |
| Bra017778.1-P | Field mustard | cytosol | 32.03 | 39.44 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 30.22 | 39.32 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 43.01 | 39.11 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 43.28 | 38.37 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 13.52 | 37.44 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 12.25 | 36.78 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 13.61 | 31.25 |
| HORVU1Hr1G029800.11 | Barley | plastid | 13.16 | 30.4 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 15.88 | 30.22 |
| HORVU3Hr1G062370.3 | Barley | golgi | 14.97 | 28.01 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G004520.2 | EnsemblPlantsGene:HORVU3Hr1G004520 | Gene3D:3.10.110.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD |
| PANTHER:PTHR44422 | PANTHER:PTHR44422:SF1 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg | SMART:SM00212 |
| SUPFAM:SSF54495 | UniParc:UPI000295B844 | UniProt:M0VQX5 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr3H:+:11719511..11727191
Molecular Weight (calculated)
121121.0 Da
IEP (calculated)
4.311
GRAVY (calculated)
-0.530
Length
1102 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENLPNVSAC IAEKNQENGT SDDAGEPEEV ADVLVYREDI VSLKSNKDAR GLVLEVAGEY DSEVSITDDE SDGEENERKS AHKTENVGPD GDNANNASHG
0101: DDIDSQSSLP DNKVRVLWID GTEMTEDIDS VVVVDRTFLH GDMVASSSDP TGQMGLVADV SLVVDLQGAH GEMIKGVSAK DLRRIREFNV GDYVVSGLWL
0201: GRVDEVFDNV SVLFDDGSVC KVSRADPMRL RLASGPMHPD TACPFYPGQR VKAVSSSVYK TSRWLHGMWK ASRLEATVTK VETAAVIVYW IASAHCGTNQ
0301: DSVPPEEQNP KDLTLLSCFS YASWQLADWC HPQLHTSSCA NDALMECSKM KELNSEQADV PESAVDVQAE QAQNTRTDVN PLEKHGDSLA DRSNMSDGDN
0401: TCVAKDSESG TSVSTVPKEG VHDHASYRKK LRKVFVKKDK RAKRRDESFE RALLIANTYT KVDVLWQDGR KECGVSSTSL IPIQTPNDHE FFPEQYAVEK
0501: VSDDVDQPSE TRRVGLVRSV NAKDRTVSVS WFRSSLHSQE PRVIECTEVV SAYELDGHPD YDYCYGDVVV RLPSVSHPME SSNGGNTMEL DKNVDSAEAS
0601: AASNAVPADV AAEEQLSQKE SSSEVTHLSW VGNIVGFQDG EIEVTWGDGS VSKVGPHEIY VVGREDDGGS LDDGAPSDAG SWETVDDNEM DLPDDPANDD
0701: PQNMVENNIQ KENASFNSQD ESSVGSGPLS VALGFVTRLA SEIFARGKKH LDGSNSDAMD EVESQQSNEV SESGDDIDKN EDENRMEASE CTTVTTNDSS
0801: AEKSVDVVMA DEAADSDCLK HFDVLQCPPD HHYLENIAHG TGGRKWVKKV QQEWGILEKN LPDYIYVRVF EDRMDLMRAV IIGASGTPYQ DGLFFFDFYL
0901: PPEFPQAPPS AYYHSGGLRV NPNLYVDGKV CLSLLNTWTG RGNEVWDPSS SSILQVLVSL QGLVLNEKPY FNEAGYEKQV GTVEGEKNAL PYNENTYLLS
1001: VKSMLYILRR PPMNFEDFVK SHFCKRGHYI LKACEAYLQG AVVGTLNDDA CPTDSNKEYS CSMGFKLALG KILPRLITAL KDIGADCSQY EHLGKTEAAQ
1101: ES
0101: DDIDSQSSLP DNKVRVLWID GTEMTEDIDS VVVVDRTFLH GDMVASSSDP TGQMGLVADV SLVVDLQGAH GEMIKGVSAK DLRRIREFNV GDYVVSGLWL
0201: GRVDEVFDNV SVLFDDGSVC KVSRADPMRL RLASGPMHPD TACPFYPGQR VKAVSSSVYK TSRWLHGMWK ASRLEATVTK VETAAVIVYW IASAHCGTNQ
0301: DSVPPEEQNP KDLTLLSCFS YASWQLADWC HPQLHTSSCA NDALMECSKM KELNSEQADV PESAVDVQAE QAQNTRTDVN PLEKHGDSLA DRSNMSDGDN
0401: TCVAKDSESG TSVSTVPKEG VHDHASYRKK LRKVFVKKDK RAKRRDESFE RALLIANTYT KVDVLWQDGR KECGVSSTSL IPIQTPNDHE FFPEQYAVEK
0501: VSDDVDQPSE TRRVGLVRSV NAKDRTVSVS WFRSSLHSQE PRVIECTEVV SAYELDGHPD YDYCYGDVVV RLPSVSHPME SSNGGNTMEL DKNVDSAEAS
0601: AASNAVPADV AAEEQLSQKE SSSEVTHLSW VGNIVGFQDG EIEVTWGDGS VSKVGPHEIY VVGREDDGGS LDDGAPSDAG SWETVDDNEM DLPDDPANDD
0701: PQNMVENNIQ KENASFNSQD ESSVGSGPLS VALGFVTRLA SEIFARGKKH LDGSNSDAMD EVESQQSNEV SESGDDIDKN EDENRMEASE CTTVTTNDSS
0801: AEKSVDVVMA DEAADSDCLK HFDVLQCPPD HHYLENIAHG TGGRKWVKKV QQEWGILEKN LPDYIYVRVF EDRMDLMRAV IIGASGTPYQ DGLFFFDFYL
0901: PPEFPQAPPS AYYHSGGLRV NPNLYVDGKV CLSLLNTWTG RGNEVWDPSS SSILQVLVSL QGLVLNEKPY FNEAGYEKQV GTVEGEKNAL PYNENTYLLS
1001: VKSMLYILRR PPMNFEDFVK SHFCKRGHYI LKACEAYLQG AVVGTLNDDA CPTDSNKEYS CSMGFKLALG KILPRLITAL KDIGADCSQY EHLGKTEAAQ
1101: ES
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.