Factsheet for HORVU3Hr1G062370.3

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	secretory
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G269000.1	Wheat	nucleus	83.87	93.21
TraesCS3B01G303300.1	Wheat	nucleus	83.7	93.02
TraesCS3A01G269200.1	Wheat	nucleus	83.53	92.83
Os09t0294300-01	Rice	nucleus	50.76	69.05
HORVU3Hr1G109730.1	Barley	cytosol	18.85	68.94
Os01t0677500-00	Rice	cytosol	38.03	64.93
GSMUA_Achr7P25120_001	Banana	cytosol	31.75	62.54
HORVU1Hr1G090980.2	Barley	cytosol	20.2	59.5
KXG33109	Sorghum	nucleus	52.46	57.87
GSMUA_Achr6P22670_001	Banana	cytosol	44.82	57.64
GSMUA_Achr9P00210_001	Banana	plastid	51.1	56.05
CDY30673	Canola	nucleus	16.98	55.25
CDY51802	Canola	cytosol	18.68	53.66
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	52.29	53.2
Bra036393.1-P	Field mustard	cytosol, extracellular	7.47	51.76
KRH26136	Soybean	cytosol	26.15	50.66
HORVU2Hr1G062530.3	Barley	cytosol	11.04	50.0
HORVU5Hr1G000190.3	Barley	cytosol	10.7	48.46
CDY25883	Canola	cytosol	22.41	46.64
AT1G53023.1	Thale cress	cytosol	24.96	46.52
HORVU3Hr1G031950.4	Barley	mitochondrion	28.52	45.78
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	25.13	45.54
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	30.39	44.97
KRH26135	Soybean	cytosol	28.86	43.7
Bra041020.1-P	Field mustard	plastid	24.11	43.16
CDY25884	Canola	plastid	23.43	41.69
CDX71178	Canola	cytosol	29.2	39.91
Solyc07g053960.2.1	Tomato	nucleus	31.24	39.74
PGSC0003DMT400047166	Potato	nucleus	31.07	39.61
VIT_12s0028g03630.t01	Wine grape	nucleus	33.62	38.75
HORVU3Hr1G031730.4	Barley	nucleus, plastid	31.41	38.54
HORVU1Hr1G029800.11	Barley	plastid	30.73	37.95
KRH58633	Soybean	cytosol, nucleus	28.69	37.72
CDY55875	Canola	nucleus	27.16	37.47
Bra030965.1-P	Field mustard	nucleus	29.88	37.45
KRH42541	Soybean	nucleus	30.05	37.34
CDY02528	Canola	cytosol	29.88	36.67
CDY47562	Canola	cytosol	29.88	36.51
Bra019007.1-P	Field mustard	cytosol	30.22	35.81
CDY24125	Canola	cytosol	29.54	35.8
CDX82439	Canola	cytosol	27.67	35.51
CDY26018	Canola	cytosol	30.56	35.43
CDY25886	Canola	cytosol	27.5	34.84
Bra040814.1-P	Field mustard	cytosol	27.5	34.84
CDX75824	Canola	cytosol	27.5	34.69
CDX98552	Canola	cytosol	30.39	32.9
CDX97660	Canola	cytosol	30.56	32.61
Bra027252.1-P	Field mustard	cytosol	30.39	32.55
AT1G53025.2	Thale cress	nucleus	30.22	31.96
Solyc10g007000.2.1	Tomato	cytosol	35.31	31.18
Bra001591.1-P	Field mustard	nucleus	28.52	31.17
Bra021105.1-P	Field mustard	nucleus	30.22	29.82
VIT_19s0014g02760.t01	Wine grape	nucleus	37.69	29.6
CDY20117	Canola	nucleus	30.05	29.6
KRH27240	Soybean	cytosol	34.8	29.12
KRH22096	Soybean	cytosol	35.48	28.91
AT3G15355.1	Thale cress	nucleus	29.71	28.74
PGSC0003DMT400064440	Potato	nucleus	35.31	28.57
CDY21838	Canola	cytosol	30.05	27.27
PGSC0003DMT400039746	Potato	nucleus	32.43	26.34
Solyc12g013820.1.1	Tomato	nucleus	32.6	25.88
KRH55293	Soybean	cytosol, peroxisome, plastid	32.26	21.86
HORVU1Hr1G085570.2	Barley	cytosol	28.69	19.95
HORVU3Hr1G004520.2	Barley	nucleus	28.01	14.97

Protein Annotations

EnsemblPlants:HORVU3Hr1G062370.3	EnsemblPlantsGene:HORVU3Hr1G062370	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF6	PFAM:PF00179	PFscan:PS50127	SMART:SM00212
SUPFAM:SSF54495	UniParc:UPI000B481C1D	UniProt:A0A287LAR7	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr3H:-:476380758..476388543

Molecular Weight (calculated)

65589.4 Da

IEP (calculated)

6.656

GRAVY (calculated)

-0.399

Length

589 amino acids

Sequence
(BLAST)

001: ERKRQNIWTL SFPFPSIPHA FYIAKIFLAP HAPAHPKQNQ HRAPAAVADD ERICRLPPPM AEGSSRSYHF GGSLVLDDPE VIEVPPEVAA GWNSGSQKRK
101: RAQVAPHEII ELDADDDPDG VTIIDAKTPD YKNKQAVGYP VNYRKNAKID LAAEDIACPS AISAKVVYPW DGLGTYHGGP KLPIYGLPAD VAGPSSFPSY
201: SWKSVGTYHT GTLLPAYFDD VLGAVKEDHY AYDEDDFSNY SYNTPPMENY SSFNLNVDHY VFPPSVGLYL PRGHVAPADS TQQRKQVKIV ESEIDEKYKA
301: FKQFDTVGDH SDHFYLKFRT VKKPSKDWVK RIQHEWKVLG KDLPDTIFVR AYEDRMDLLR AVIVGPAGTP YHDGLFFFDV YFPSQYPCKP PQVSYRSGGL
401: RLNPNLYACG KVCLSLLNTW TGSGCEMWNP SSSTMLQVLV SIQALVLNAK PYFNEPGHSV YANTPHGEQH SLAYNEETFL LSCRTMLYSL RNPPKHFEHF
501: IGGHFRKYGR DILVGCKAYM GGAQVGCLAG NGVQDVDEGD KSCSQNFKCS LEILMKGLVN EFTDLGVGCH EFQAQAVNPG AAADTTLRL

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.