Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24125 | Canola | cytosol | 89.96 | 94.03 |
| CDY30673 | Canola | nucleus | 28.54 | 80.11 |
| CDY55875 | Canola | nucleus | 66.34 | 78.92 |
| CDY51802 | Canola | cytosol | 31.1 | 77.07 |
| CDY02528 | Canola | cytosol | 70.87 | 75.0 |
| CDY47562 | Canola | cytosol | 71.06 | 74.9 |
| CDX71178 | Canola | cytosol | 63.19 | 74.48 |
| CDY25883 | Canola | cytosol | 41.14 | 73.85 |
| CDY25884 | Canola | plastid | 46.85 | 71.9 |
| CDY25886 | Canola | cytosol | 65.16 | 71.18 |
| AT1G53023.1 | Thale cress | cytosol | 41.93 | 67.41 |
| AT1G53025.2 | Thale cress | nucleus | 69.29 | 63.2 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 18.5 | 58.39 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 21.65 | 55.0 |
| CDX82439 | Canola | cytosol | 44.29 | 49.02 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 28.15 | 47.83 |
| KRH26136 | Soybean | cytosol | 28.15 | 47.04 |
| CDX75824 | Canola | cytosol | 42.72 | 46.47 |
| Zm00001d009007_P001 | Maize | cytosol | 21.85 | 45.31 |
| CDX98552 | Canola | cytosol | 48.03 | 44.85 |
| CDX97660 | Canola | cytosol | 48.43 | 44.57 |
| Os01t0677500-00 | Rice | cytosol | 28.94 | 42.61 |
| CDY20117 | Canola | nucleus | 49.41 | 41.97 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 28.15 | 41.81 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 10.43 | 40.77 |
| KRH26135 | Soybean | cytosol | 31.1 | 40.62 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 10.24 | 40.0 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 15.75 | 39.6 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 29.33 | 39.42 |
| CDY21838 | Canola | cytosol | 50.0 | 39.14 |
| KXG31477 | Sorghum | mitochondrion, plastid | 28.35 | 39.13 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 15.55 | 39.11 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 28.54 | 38.77 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 28.74 | 38.73 |
| Os09t0294300-01 | Rice | nucleus | 32.87 | 38.57 |
| Zm00001d009513_P003 | Maize | cytosol | 29.33 | 37.53 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 26.77 | 36.96 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 28.94 | 36.93 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 26.57 | 36.78 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 26.57 | 36.78 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 26.97 | 36.73 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 32.87 | 36.46 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 26.38 | 36.41 |
| Os05t0557600-01 | Rice | cytosol | 35.83 | 35.76 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 30.91 | 34.81 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 30.71 | 34.51 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 30.51 | 34.44 |
| EES19929 | Sorghum | nucleus | 34.25 | 34.32 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 30.51 | 34.14 |
| Zm00001d047959_P001 | Maize | cytosol | 14.96 | 34.08 |
| GSMUA_Achr10P... | Banana | nucleus | 31.89 | 34.03 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 35.83 | 33.89 |
| Os05t0232500-01 | Rice | nucleus, plastid | 31.1 | 33.83 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 35.24 | 33.77 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 35.24 | 33.77 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 35.04 | 33.58 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 29.92 | 33.55 |
| KXG31481 | Sorghum | nucleus | 30.12 | 33.33 |
| EES17914 | Sorghum | plastid | 30.12 | 33.26 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 29.53 | 33.11 |
| HORVU1Hr1G029800.11 | Barley | plastid | 30.71 | 32.7 |
| Os01t0232500-01 | Rice | nucleus | 31.1 | 32.58 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 30.71 | 32.5 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 35.63 | 32.26 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 31.3 | 32.25 |
| KXG33109 | Sorghum | nucleus | 33.86 | 32.21 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 35.24 | 32.02 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 35.04 | 31.73 |
| KRH27240 | Soybean | cytosol | 43.9 | 31.68 |
| Zm00001d049101_P001 | Maize | cytosol | 9.65 | 31.41 |
| Os01t0233900-01 | Rice | mitochondrion | 28.74 | 31.4 |
| Solyc10g007000.2.1 | Tomato | cytosol | 41.14 | 31.33 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 35.63 | 31.26 |
| CDX72600 | Canola | cytosol | 7.28 | 30.83 |
| KRH22096 | Soybean | cytosol | 43.7 | 30.71 |
| HORVU3Hr1G062370.3 | Barley | golgi | 35.43 | 30.56 |
| TraesCS1B01G146400.2 | Wheat | plastid | 31.1 | 30.44 |
| TraesCS1D01G125200.2 | Wheat | plastid | 31.1 | 30.33 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 43.9 | 29.73 |
| PGSC0003DMT400064440 | Potato | nucleus | 41.93 | 29.26 |
| PGSC0003DMT400039746 | Potato | nucleus | 37.2 | 26.07 |
| Solyc12g013820.1.1 | Tomato | nucleus | 37.6 | 25.74 |
| Os01t0229900-01 | Rice | mitochondrion | 12.99 | 24.26 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 38.78 | 22.67 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 26.97 | 20.39 |
| CDY53783 | Canola | nucleus | 30.71 | 18.42 |
| CDY37693 | Canola | nucleus | 30.51 | 17.92 |
| CDX89761 | Canola | nucleus | 30.32 | 14.71 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 25.98 | 10.89 |
| Os03t0679300-01 | Rice | mitochondrion | 3.35 | 10.24 |
Protein Annotations
| EnsemblPlants:CDY26018 | EnsemblPlantsGene:GSBRNA2T00033556001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY26018 |
| ProteinID:CDY26018.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EE29F6 | UniProt:A0A078GN46 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC06g06060DBnaC06g06060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN46]
Coordinates
chrLK032184:+:237517..239726
Molecular Weight (calculated)
56758.0 Da
IEP (calculated)
6.594
GRAVY (calculated)
-0.443
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPDVVEIAP PLFPSGSRTR KPRKAVIPEV IDVEQYEFRS GGVVNNNNNS LVDVKNKGKA IQDGSFYDYN LFNHVDNGMM HVDIDDYSMF QAVLNSQDFP
101: TDVEVFMSTT QPWGFPDSKG SRSSSTEAVW NTSMETPQSW DFFSGLAFPQ TSSYSSVSSS TMVLPQAPDI VMVPAPPPSR SFKLDGSGSS SKTLAAEVVP
201: SAQADFLKSF KRFETVEDFS DHHYASKGKA SKQHSKNWVK KVQADWQILE NDLPETIFVR ACESRMDLLR AVIIGAEGTP YHDGLFFFDI QFPDSYPSAP
301: PKVHYHSGGL RINPNLYNCG KVCLSLLGTW TGNSREKWLP KESTMLQLLV SIQALILNQK PYFNEPGYEM TMGTPSGEAH SKVYSENVFI LSLRTMVYSM
401: RNPPKHFEEF VRSHYFVRAL DIVKACNAYK DGAPVASIVK GGVQDIEETS ESGSKKFRND VAAFMKTVVD ELVKLGVKEL EEKPKPLPEN NANAESIKGN
501: RKRSRSVR
101: TDVEVFMSTT QPWGFPDSKG SRSSSTEAVW NTSMETPQSW DFFSGLAFPQ TSSYSSVSSS TMVLPQAPDI VMVPAPPPSR SFKLDGSGSS SKTLAAEVVP
201: SAQADFLKSF KRFETVEDFS DHHYASKGKA SKQHSKNWVK KVQADWQILE NDLPETIFVR ACESRMDLLR AVIIGAEGTP YHDGLFFFDI QFPDSYPSAP
301: PKVHYHSGGL RINPNLYNCG KVCLSLLGTW TGNSREKWLP KESTMLQLLV SIQALILNQK PYFNEPGYEM TMGTPSGEAH SKVYSENVFI LSLRTMVYSM
401: RNPPKHFEEF VRSHYFVRAL DIVKACNAYK DGAPVASIVK GGVQDIEETS ESGSKKFRND VAAFMKTVVD ELVKLGVKEL EEKPKPLPEN NANAESIKGN
501: RKRSRSVR
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.