Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97660 | Canola | cytosol | 96.32 | 94.93 |
| CDX82439 | Canola | cytosol | 59.38 | 70.37 |
| CDY20117 | Canola | nucleus | 76.65 | 69.73 |
| CDY51802 | Canola | cytosol | 25.55 | 67.8 |
| CDY30673 | Canola | nucleus | 22.24 | 66.85 |
| CDY21838 | Canola | cytosol | 77.94 | 65.33 |
| CDX75824 | Canola | cytosol | 56.07 | 65.31 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 17.46 | 59.01 |
| AT3G15355.1 | Thale cress | nucleus | 65.26 | 58.29 |
| CDY25883 | Canola | cytosol | 30.15 | 57.95 |
| CDY25884 | Canola | plastid | 32.35 | 53.17 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 19.3 | 52.5 |
| CDX71178 | Canola | cytosol | 41.18 | 51.97 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 28.49 | 51.84 |
| CDY55875 | Canola | nucleus | 39.34 | 50.12 |
| CDY24125 | Canola | cytosol | 43.38 | 48.56 |
| KRH26136 | Soybean | cytosol | 27.02 | 48.36 |
| CDY26018 | Canola | cytosol | 44.85 | 48.03 |
| CDY02528 | Canola | cytosol | 41.36 | 46.88 |
| CDY25886 | Canola | cytosol | 39.89 | 46.67 |
| CDY47562 | Canola | cytosol | 41.18 | 46.47 |
| Zm00001d009007_P001 | Maize | cytosol | 20.77 | 46.12 |
| Os01t0677500-00 | Rice | cytosol | 28.68 | 45.22 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 27.57 | 43.86 |
| KRH26135 | Soybean | cytosol | 30.7 | 42.93 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 15.81 | 42.57 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 15.62 | 42.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 9.93 | 41.54 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 9.93 | 41.54 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 28.12 | 40.91 |
| Zm00001d009513_P003 | Maize | cytosol | 29.78 | 40.81 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 28.31 | 40.74 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 28.12 | 40.58 |
| KXG31477 | Sorghum | mitochondrion, plastid | 26.84 | 39.67 |
| Os09t0294300-01 | Rice | nucleus | 31.07 | 39.03 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 26.29 | 38.96 |
| EES17914 | Sorghum | plastid | 32.9 | 38.91 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 26.1 | 38.69 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 26.1 | 38.59 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 25.92 | 38.32 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 31.8 | 38.27 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 32.17 | 38.21 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 31.62 | 38.14 |
| Zm00001d047959_P001 | Maize | cytosol | 15.62 | 38.12 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 31.8 | 38.11 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 27.76 | 37.94 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 25.92 | 37.8 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 31.07 | 37.56 |
| Os05t0232500-01 | Rice | nucleus, plastid | 31.99 | 37.26 |
| KXG31481 | Sorghum | nucleus | 31.25 | 37.04 |
| GSMUA_Achr10P... | Banana | nucleus | 32.17 | 36.76 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 30.51 | 36.64 |
| HORVU1Hr1G029800.11 | Barley | plastid | 31.99 | 36.48 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 30.33 | 36.42 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 35.66 | 36.13 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 32.72 | 36.11 |
| Os05t0557600-01 | Rice | cytosol | 33.64 | 35.95 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 31.25 | 35.42 |
| Zm00001d049101_P001 | Maize | cytosol | 10.11 | 35.26 |
| Os01t0232500-01 | Rice | nucleus | 31.07 | 34.85 |
| EES19929 | Sorghum | nucleus | 31.99 | 34.32 |
| TraesCS1B01G146400.2 | Wheat | plastid | 32.72 | 34.3 |
| TraesCS1D01G125200.2 | Wheat | plastid | 32.72 | 34.17 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 32.9 | 33.77 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 32.9 | 33.77 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 32.72 | 33.58 |
| KXG33109 | Sorghum | nucleus | 32.72 | 33.33 |
| Os01t0233900-01 | Rice | mitochondrion | 27.39 | 32.04 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 32.9 | 31.91 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 32.72 | 31.73 |
| CDX72600 | Canola | cytosol | 6.99 | 31.67 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 32.54 | 31.66 |
| Solyc10g007000.2.1 | Tomato | cytosol | 38.6 | 31.48 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 33.09 | 31.09 |
| KRH27240 | Soybean | cytosol | 39.89 | 30.82 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 42.46 | 30.8 |
| HORVU3Hr1G062370.3 | Barley | golgi | 32.9 | 30.39 |
| KRH22096 | Soybean | cytosol | 39.15 | 29.46 |
| PGSC0003DMT400064440 | Potato | nucleus | 39.34 | 29.4 |
| PGSC0003DMT400039746 | Potato | nucleus | 38.79 | 29.1 |
| Solyc12g013820.1.1 | Tomato | nucleus | 38.97 | 28.57 |
| Os01t0229900-01 | Rice | mitochondrion | 13.42 | 26.84 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 35.85 | 22.44 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 26.84 | 21.73 |
| CDY53783 | Canola | nucleus | 28.86 | 18.54 |
| CDY37693 | Canola | nucleus | 28.68 | 18.03 |
| CDX89761 | Canola | nucleus | 28.31 | 14.71 |
| Os03t0679300-01 | Rice | mitochondrion | 4.04 | 13.25 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 24.82 | 11.14 |
Protein Annotations
| EnsemblPlants:CDX98552 | EnsemblPlantsGene:GSBRNA2T00106209001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX98552 |
| ProteinID:CDX98552.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EE108C | MapMan:35.1 |
Description
BnaC05g38230D
Coordinates
chrLK031905:+:976171..978866
Molecular Weight (calculated)
60022.9 Da
IEP (calculated)
4.554
GRAVY (calculated)
-0.499
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEIAHPVA SCSITLTPNK APTSDVNGVE EQYDMQNGGG VDNKNKGKAI QLESQSDDEQ PEGSASDCYD PGSSPLSDSL LDPDSLVYED DDDYSDHYAY
101: GIEDEIEDDH ADDYVSEYQA LFDAKEKEIP AGVEVAMDWL PSSETAKPSG SSSSSKKATT GSGIYLTPNN AYALPQKIHG FHYSGPALKY SSTHLGPKTD
201: PGTVMGEAPV PAPASSGLSL QMSKKNPGYL GFASTRPHVE EVISAPNTYT VKRNVEDYLG KYLFFKKFDI VEDLVDHHYA AKGTTSKQHS KEWAKRIQEE
301: WKILENDLPE QTIFVRAYES RMDLLRAVIV GADGTPYHDG LFFFDIFFPD TYPSGPPMVH YHSGGLRINP NLYNSGKVCL SLLGTWSGVQ TEKWIPNEST
401: MLQVLVSIQG LILNQKPFFN EPGYERMAGS LSGECQSNAY SEKIFLLSLK TMVYNMRRPP KYFEDFAYGH FLSSAHDVLK ACNAYRNGAP VASLVRGNVK
501: GGEESSERCS ESFKKDVGAF VDTLLLKEFI LLGVLGLEPE KEED
101: GIEDEIEDDH ADDYVSEYQA LFDAKEKEIP AGVEVAMDWL PSSETAKPSG SSSSSKKATT GSGIYLTPNN AYALPQKIHG FHYSGPALKY SSTHLGPKTD
201: PGTVMGEAPV PAPASSGLSL QMSKKNPGYL GFASTRPHVE EVISAPNTYT VKRNVEDYLG KYLFFKKFDI VEDLVDHHYA AKGTTSKQHS KEWAKRIQEE
301: WKILENDLPE QTIFVRAYES RMDLLRAVIV GADGTPYHDG LFFFDIFFPD TYPSGPPMVH YHSGGLRINP NLYNSGKVCL SLLGTWSGVQ TEKWIPNEST
401: MLQVLVSIQG LILNQKPFFN EPGYERMAGS LSGECQSNAY SEKIFLLSLK TMVYNMRRPP KYFEDFAYGH FLSSAHDVLK ACNAYRNGAP VASLVRGNVK
501: GGEESSERCS ESFKKDVGAF VDTLLLKEFI LLGVLGLEPE KEED
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.