Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021874.1-P | Field mustard | nucleus | 97.57 | 97.57 |
| CDY53783 | Canola | nucleus | 94.45 | 96.46 |
| AT2G33770.1 | Thale cress | nucleus | 85.09 | 81.15 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 19.54 | 70.12 |
| CDY30673 | Canola | nucleus | 10.98 | 52.49 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 55.38 | 50.74 |
| CDX72600 | Canola | cytosol | 6.94 | 50.0 |
| PGSC0003DMT400076435 | Potato | nucleus | 52.14 | 48.7 |
| KRH21442 | Soybean | nucleus | 51.56 | 48.53 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 52.25 | 48.45 |
| KRH50043 | Soybean | cytosol | 51.68 | 48.22 |
| Solyc02g078210.2.1 | Tomato | cytosol | 51.45 | 48.11 |
| KRH10881 | Soybean | nucleus | 50.75 | 47.51 |
| CDY51802 | Canola | cytosol | 11.21 | 47.32 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 47.63 | 46.09 |
| Os05t0557700-01 | Rice | cytosol | 44.86 | 44.29 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 42.66 | 43.77 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 42.77 | 43.68 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 42.43 | 43.48 |
| EES19930 | Sorghum | cytosol | 43.47 | 43.17 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 42.54 | 43.09 |
| CDY25884 | Canola | plastid | 15.72 | 41.09 |
| CDY25883 | Canola | cytosol | 13.29 | 40.64 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 26.59 | 34.23 |
| CDY55875 | Canola | nucleus | 16.88 | 34.19 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 19.31 | 33.74 |
| CDX89761 | Canola | nucleus | 39.42 | 32.57 |
| CDX71178 | Canola | cytosol | 16.18 | 32.48 |
| CDY47562 | Canola | cytosol | 17.57 | 31.54 |
| CDY24125 | Canola | cytosol | 17.69 | 31.48 |
| CDY02528 | Canola | cytosol | 17.46 | 31.46 |
| CDX82439 | Canola | cytosol | 16.65 | 31.37 |
| CDY25886 | Canola | cytosol | 16.65 | 30.97 |
| CDY26018 | Canola | cytosol | 17.92 | 30.51 |
| CDX75824 | Canola | cytosol | 16.3 | 30.19 |
| CDX98552 | Canola | cytosol | 18.03 | 28.68 |
| CDX97660 | Canola | cytosol | 18.15 | 28.44 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 36.99 | 26.4 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 43.01 | 25.83 |
| CDY20117 | Canola | nucleus | 17.8 | 25.75 |
| CDY21838 | Canola | cytosol | 18.38 | 24.5 |
Protein Annotations
| EnsemblPlants:CDY37693 | EnsemblPlantsGene:GSBRNA2T00064585001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY37693 |
| ProteinID:CDY37693.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EDB8A1 | UniProt:A0A078HLG4 |
| MapMan:25.3.1.2 | : | : | : | : | : |
Description
BnaA04g19750DBnaA04g19750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLG4]
Coordinates
chrLK032406:+:106433..111146
Molecular Weight (calculated)
95724.4 Da
IEP (calculated)
4.574
GRAVY (calculated)
-0.288
Length
865 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMNLTDSDW ESSSDSGSSE QEEVEFSYGG RAQDIFSNLE ETIGKIDDFL SFERGFMYGD IVRSAAEPSG QSGRVINVDM SVNLESIHGK VVKEVDTKRL
101: QRLRSISLCD YVINGPWLGR VDKIVERVSV TLDDGSNYEV LVRNQDQLVA VPPNMLEDSQ YTYYPGQRVQ VKLAHAPRST SWLCGNWREN QALGTVCSVE
201: AGLVYVEWVA SIIMGGGDRN LTAPQALQSP ESLTLLPSVS HASWQLGDWC ILPGASHCDA EELQKGFSRN MQRSSSDELF VITKTKMKVD VLWQDGGCSM
301: GVDSQQLLPV GAVNAHDFWP EQFVVEKETC NSKRWGVVKV VNAKEQTVKV QWRTLAEKEA SEQMEDTVSA YELLEHPDFG FCYSDVVFSV ATETKHLLTD
401: CDYSGAYCLS SIGVVAGFRN GVVEVKWANG STSEVAPFEI WRMERSEFSN SSTISSAGSV QDLSQKIAQS DESSSNHQET GLVNLYSVGE SCNNNVLESS
501: SFFLPKAAIG FITNLASSLF GSHGSTSAIS SHSLCNDTED QNDSEVLVQE AAESYDISES KSDEVDVDMM VNLPIVGKGI NKTLDSTIVS FKQFDMVTDC
601: SDHHFFSPGK ELAQPPVTKS WVKKVQQEWS NLEADLPNTI YVRVYEERMD LIRAALVGAP GTPYHDGLFF FDIMLPPQYP HEPPMVHYHS GGMRLNPNLY
701: ESGRVCLSLL NTWNGSGTEM WNPGSSSILQ VLLSFQALVL NEKPYFNEAG YDKQLGRAEG EKNSVSYNEN AFLITCKSMI SLLRKPPKHF EVLVKDHFKH
801: RAQHVLAACK AYMEGVPVGS SAKLQESSTT NSTGFKIMLT KLYPKLVEAF SEIGVDCSQG VALEP
101: QRLRSISLCD YVINGPWLGR VDKIVERVSV TLDDGSNYEV LVRNQDQLVA VPPNMLEDSQ YTYYPGQRVQ VKLAHAPRST SWLCGNWREN QALGTVCSVE
201: AGLVYVEWVA SIIMGGGDRN LTAPQALQSP ESLTLLPSVS HASWQLGDWC ILPGASHCDA EELQKGFSRN MQRSSSDELF VITKTKMKVD VLWQDGGCSM
301: GVDSQQLLPV GAVNAHDFWP EQFVVEKETC NSKRWGVVKV VNAKEQTVKV QWRTLAEKEA SEQMEDTVSA YELLEHPDFG FCYSDVVFSV ATETKHLLTD
401: CDYSGAYCLS SIGVVAGFRN GVVEVKWANG STSEVAPFEI WRMERSEFSN SSTISSAGSV QDLSQKIAQS DESSSNHQET GLVNLYSVGE SCNNNVLESS
501: SFFLPKAAIG FITNLASSLF GSHGSTSAIS SHSLCNDTED QNDSEVLVQE AAESYDISES KSDEVDVDMM VNLPIVGKGI NKTLDSTIVS FKQFDMVTDC
601: SDHHFFSPGK ELAQPPVTKS WVKKVQQEWS NLEADLPNTI YVRVYEERMD LIRAALVGAP GTPYHDGLFF FDIMLPPQYP HEPPMVHYHS GGMRLNPNLY
701: ESGRVCLSLL NTWNGSGTEM WNPGSSSILQ VLLSFQALVL NEKPYFNEAG YDKQLGRAEG EKNSVSYNEN AFLITCKSMI SLLRKPPKHF EVLVKDHFKH
801: RAQHVLAACK AYMEGVPVGS SAKLQESSTT NSTGFKIMLT KLYPKLVEAF SEIGVDCSQG VALEP
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.