Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G388400.1 | Wheat | cytosol | 97.16 | 97.27 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 96.21 | 95.87 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 96.92 | 95.78 |
| Os05t0557700-01 | Rice | cytosol | 81.16 | 78.2 |
| EES19930 | Sorghum | cytosol | 79.5 | 77.04 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 18.13 | 63.49 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 12.56 | 49.3 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 51.9 | 48.99 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 13.15 | 47.64 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 78.32 | 45.9 |
| CDY53783 | Canola | nucleus | 43.6 | 43.45 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 47.75 | 42.69 |
| PGSC0003DMT400076435 | Potato | nucleus | 46.8 | 42.66 |
| CDY37693 | Canola | nucleus | 43.48 | 42.43 |
| Bra021874.1-P | Field mustard | nucleus | 43.36 | 42.31 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 46.68 | 42.23 |
| KRH21442 | Soybean | nucleus | 45.85 | 42.11 |
| Solyc02g078210.2.1 | Tomato | cytosol | 46.09 | 42.05 |
| KRH50043 | Soybean | cytosol | 45.85 | 41.75 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 18.48 | 41.38 |
| KRH10881 | Soybean | nucleus | 44.91 | 41.02 |
| AT2G33770.1 | Thale cress | nucleus | 43.72 | 40.68 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 17.54 | 40.22 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 18.25 | 34.07 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 19.79 | 33.74 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 17.18 | 32.01 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 21.21 | 31.91 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 20.02 | 31.89 |
| TraesCS1B01G146400.2 | Wheat | plastid | 19.08 | 31.02 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 38.98 | 29.53 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 30.57 | 28.89 |
| TraesCS2B01G596800.1 | Wheat | cytosol | 29.74 | 26.9 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 31.04 | 26.9 |
| TraesCS3B01G029100.1 | Wheat | cytosol, nucleus, plasma membrane | 29.98 | 25.48 |
| TraesCS3B01G029000.1 | Wheat | cytosol, nucleus, plasma membrane | 29.74 | 25.35 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 30.45 | 24.81 |
| TraesCS2B01G590500.1 | Wheat | cytosol | 17.3 | 23.82 |
| TraesCS2B01G590700.1 | Wheat | cytosol | 16.35 | 21.23 |
Protein Annotations
| MapMan:25.3.1.2 | Gene3D:3.10.110.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006817 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0016036 | GO:GO:0019538 | GO:GO:0044257 | GO:GO:0055062 | GO:GO:2000185 | InterPro:IPR000608 |
| InterPro:IPR016135 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | SMART:SM00212 |
| SUPFAM:SSF54495 | EnsemblPlantsGene:TraesCS1B01G415800 | EnsemblPlants:TraesCS1B01G415800.1 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | SEG:seg |
Description
No Description!
Coordinates
chr1B:-:640845640..640849718
Molecular Weight (calculated)
93740.8 Da
IEP (calculated)
4.566
GRAVY (calculated)
-0.216
Length
844 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLFVIDSDS ESYSGTSDSE DQEECEFTDH AQSILSSLDE SIGKIDDFLT FERGFLHGDI VCPVSDPSGQ LGRVVGVEMF VDLETYSGDI IEDVNSKQLS
101: RVRSFVSGDC VVMGPWIGRV IRAFDLVTVV FSDGAKCEML LRDSEVLKPI PPILFEDAPY FYYPSQRVRI VHPSVSKSGT WFSGSWRASR DEGVVSHVDV
201: GLVHVNWITS VANVWGDRSS SPPNFQDSKN LTLLSCFPYA NWQLGDWCTL SAGHDGSLPS EDRKFSRYSQ TYVVAKTKST FDVLWQNGST SLGLEPYILA
301: PVSTPGDHDF WPGQFVLEKL AVEEAAERQR IGIVRNVDAL ERTANVKWIV PVDDDIVRYG SDSTEETVSA YELVEHPDFS FCTGEVVIRS ALNIDKSEAD
401: LTNGTMTVSR KSLDTSSGFL SCIGNVLGYK DDGIEVQWAS GVISKAQHFE IIGLERLLDN SLGSVNEVHT FVDDEAEQET IRHESTKNAL EESGEDCTGS
501: LRNAFYFSKT AFNFLTNVAS SFFGAHDSTS SSSITAVPLY QIVKSADLHS SAEEFSVVEL VMQTEKPQLP SENDVKIFDV VVDCSDHHFV KERGHENVKR
601: GWLKKIQQEW TILQNDLPDD IHVRVYEERM DLLRACIVGA AGTPYHDNLF FFDIFFPPDY PHEPPSVHYH SGGLRLNPNL YETGKVCLSL LKTWAGTGNE
701: VWNPEGSTIL QLLLSLQALV LNEKPYFNEA GYDKFVGKAD GEKNSITYNE NAFLLSCKSM MYILHKPPKH FENFVKEHFT RLAPHILGAC NAYLGGDLVG
801: HAGDSTYISD DGCKSCSTGF KIMLGKLLPK LVAAFSEAGI ARGQ
101: RVRSFVSGDC VVMGPWIGRV IRAFDLVTVV FSDGAKCEML LRDSEVLKPI PPILFEDAPY FYYPSQRVRI VHPSVSKSGT WFSGSWRASR DEGVVSHVDV
201: GLVHVNWITS VANVWGDRSS SPPNFQDSKN LTLLSCFPYA NWQLGDWCTL SAGHDGSLPS EDRKFSRYSQ TYVVAKTKST FDVLWQNGST SLGLEPYILA
301: PVSTPGDHDF WPGQFVLEKL AVEEAAERQR IGIVRNVDAL ERTANVKWIV PVDDDIVRYG SDSTEETVSA YELVEHPDFS FCTGEVVIRS ALNIDKSEAD
401: LTNGTMTVSR KSLDTSSGFL SCIGNVLGYK DDGIEVQWAS GVISKAQHFE IIGLERLLDN SLGSVNEVHT FVDDEAEQET IRHESTKNAL EESGEDCTGS
501: LRNAFYFSKT AFNFLTNVAS SFFGAHDSTS SSSITAVPLY QIVKSADLHS SAEEFSVVEL VMQTEKPQLP SENDVKIFDV VVDCSDHHFV KERGHENVKR
601: GWLKKIQQEW TILQNDLPDD IHVRVYEERM DLLRACIVGA AGTPYHDNLF FFDIFFPPDY PHEPPSVHYH SGGLRLNPNL YETGKVCLSL LKTWAGTGNE
701: VWNPEGSTIL QLLLSLQALV LNEKPYFNEA GYDKFVGKAD GEKNSITYNE NAFLLSCKSM MYILHKPPKH FENFVKEHFT RLAPHILGAC NAYLGGDLVG
801: HAGDSTYISD DGCKSCSTGF KIMLGKLLPK LVAAFSEAGI ARGQ
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.