Factsheet for TraesCS7B01G110500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G206600.1	Wheat	cytosol	91.85	91.85
TraesCS3B01G029300.1	Wheat	peroxisome	63.95	69.3
Os05t0153132-00	Rice	cytosol	63.52	56.49
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	48.07	29.71
TraesCS3B01G183800.2	Wheat	nucleus	45.49	28.8
TraesCS5B01G264000.1	Wheat	nucleus	48.07	24.72
TraesCS3B01G183000.1	Wheat	nucleus, plastid	44.64	23.01
TraesCS3B01G303300.1	Wheat	nucleus	51.07	22.45
TraesCS1B01G146400.2	Wheat	plastid	48.07	21.58
TraesCS1B01G415500.2	Wheat	nucleus	50.64	21.03
TraesCS2B01G421500.1	Wheat	golgi, mitochondrion, plasma membrane	77.25	18.48
TraesCS5B01G359000.1	Wheat	cytosol	68.24	17.81
TraesCS3B01G029100.1	Wheat	cytosol, nucleus, plasma membrane	73.82	17.32
TraesCS3B01G029000.1	Wheat	cytosol, nucleus, plasma membrane	72.96	17.17
TraesCS2B01G596800.1	Wheat	cytosol	68.67	17.15
OQU79703	Sorghum	cytosol	62.23	16.8
TraesCS2B01G461900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	72.96	16.41
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	52.36	14.39
TraesCS1B01G415800.1	Wheat	cytosol	47.64	13.15
TraesCS3B01G034500.5	Wheat	nucleus	60.52	12.66
TraesCS2B01G590500.1	Wheat	cytosol	10.73	4.08
TraesCS2B01G590700.1	Wheat	cytosol	10.3	3.69
KRH36075	Soybean	nucleus	0.43	0.19

Protein Annotations

EnsemblPlants:TraesCS7B01G110500.1	EnsemblPlantsGene:TraesCS7B01G110500	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44422	PFAM:PF00179	PFscan:PS50127	SEG:seg	SMART:SM00212
SUPFAM:SSF54495	TIGR:cd00195	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7B:+:126178444..126179145

Molecular Weight (calculated)

26106.3 Da

IEP (calculated)

5.305

GRAVY (calculated)

-0.056

Length

233 amino acids

Sequence
(BLAST)

001: MNFSRTYADT IYVRAFEDRM DLLRAVIVGP SGTPYQDGLF FFDLQLPLSY PAAPPQVYYH SFGLRLNPYL YASGTVCLSL LNTFGGDGTE VWSPVTSTLL
101: QVLVSIQGLV LNNQPYYNEA GYEDLVGTPE GRRNALPYNV KAYLLTLRAM LHLLRRQLQG FEEFMKDHFR QRGRFVLRAC EAYLQGCIVG TLTSDASPTE
201: ESNERPCSPG LRLALTNVVP SLMEAIREVG AEV

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.