Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G289700.1 | Wheat | cytosol | 18.93 | 73.8 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 16.46 | 68.37 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 17.81 | 68.24 |
| TraesCS2B01G596800.1 | Wheat | cytosol | 59.13 | 56.59 |
| Os05t0153132-00 | Rice | cytosol | 16.35 | 55.73 |
| TraesCS3B01G029100.1 | Wheat | cytosol, nucleus, plasma membrane | 52.52 | 47.23 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 51.29 | 47.02 |
| TraesCS3B01G029000.1 | Wheat | cytosol, nucleus, plasma membrane | 51.4 | 46.36 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 51.06 | 44.02 |
| OQU79703 | Sorghum | cytosol | 40.09 | 41.48 |
| TraesCS2B01G590500.1 | Wheat | cytosol | 25.87 | 37.68 |
| TraesCS2B01G590700.1 | Wheat | cytosol | 26.09 | 35.85 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 33.37 | 35.14 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 14.56 | 34.48 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 13.55 | 32.88 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 38.97 | 31.24 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 28.89 | 30.57 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 15.23 | 30.09 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 15.23 | 30.02 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 17.13 | 28.87 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 17.92 | 28.52 |
| TraesCS1B01G146400.2 | Wheat | plastid | 16.35 | 28.13 |
| KRH36075 | Soybean | nucleus | 12.54 | 21.21 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G359000.1 | EnsemblPlantsGene:TraesCS5B01G359000 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5B:+:538934287..538939229
Molecular Weight (calculated)
97296.4 Da
IEP (calculated)
4.375
GRAVY (calculated)
-0.245
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATEEACVR YTNLYWLDLV SSKSARGNEE RIFERGLVVP LKAADADSFM TLGINGALVS MKGRDMTIVD RSCTYVGQMV VSGSDVGGQM GVVVGVSTTL
101: DLVQLNVHGE ATKTIRGVRP SGLRRVRALS LGDYVVSGQW LGRVVQVFLD VDVVFDDGAV CKVTDAEPKK LRAANTVATF RPQMNCAFYS GEQVTGDRGD
201: PSAVFRESQW LDGSWKPEHE VGSVSRVEMV GVLVYWVASA HGGTDEQVLE MSAPSAYQNP NDLTFFCSSS DCTWGLGDRC FLITKTDDDT SDHHHQDESL
301: HALPTMTVSS THTIVDVLWQ DGTRQHRAPS ISLNPSECTN EHEFFPGQYV VDNAPVDVTF AVVGDDDVVS ATDDASTRRV GVVRSLNSND HTVQVSWIKA
401: NNEAGNLSLE VECDSTTASA YDLSRDPDHS VFYGDIVVRL LSSVAGSRPA VVVQQPQAPA DLSWVGQVVN LCVDGHVQVK WGDGTTSMVL PHEISVVNKD
501: NYTQLQAEMD NWAEEDAIVD DPQELGAANV HNDPTDTTSV EGDDGSVDEL DGHAAVIMQN LAQASARSHE DPSVGGAATE YNIADLAARS DASVDASNSD
601: TVEDVVKVTD ATGDDDHRPF NLPHFDVVQS PPDDHHYLDT TDQGSTGKKR WVKTVQKEWK ILENSLPDGI YVRAFEGRMD LLRVVMVGAS GTPYQDGLFF
701: FDMQLPPSYP AVPPQVYYHS FGLHLNPNLY PSGTVCLSLL NTFDGEGTEV WSPGTSSLLQ VVVSLQALVL NDQPYYNEAS LEALIDTPEG HRNALPYCEN
801: AFLLSSRTML HLVRRPPQGF EGFVKDHFRR RGRYVLRMCE AYLKGCVPVE EGGMELPCSA GFNIALANVV PRLMAAFTKV GDEGSDLSST TTQ
101: DLVQLNVHGE ATKTIRGVRP SGLRRVRALS LGDYVVSGQW LGRVVQVFLD VDVVFDDGAV CKVTDAEPKK LRAANTVATF RPQMNCAFYS GEQVTGDRGD
201: PSAVFRESQW LDGSWKPEHE VGSVSRVEMV GVLVYWVASA HGGTDEQVLE MSAPSAYQNP NDLTFFCSSS DCTWGLGDRC FLITKTDDDT SDHHHQDESL
301: HALPTMTVSS THTIVDVLWQ DGTRQHRAPS ISLNPSECTN EHEFFPGQYV VDNAPVDVTF AVVGDDDVVS ATDDASTRRV GVVRSLNSND HTVQVSWIKA
401: NNEAGNLSLE VECDSTTASA YDLSRDPDHS VFYGDIVVRL LSSVAGSRPA VVVQQPQAPA DLSWVGQVVN LCVDGHVQVK WGDGTTSMVL PHEISVVNKD
501: NYTQLQAEMD NWAEEDAIVD DPQELGAANV HNDPTDTTSV EGDDGSVDEL DGHAAVIMQN LAQASARSHE DPSVGGAATE YNIADLAARS DASVDASNSD
601: TVEDVVKVTD ATGDDDHRPF NLPHFDVVQS PPDDHHYLDT TDQGSTGKKR WVKTVQKEWK ILENSLPDGI YVRAFEGRMD LLRVVMVGAS GTPYQDGLFF
701: FDMQLPPSYP AVPPQVYYHS FGLHLNPNLY PSGTVCLSLL NTFDGEGTEV WSPGTSSLLQ VVVSLQALVL NDQPYYNEAS LEALIDTPEG HRNALPYCEN
801: AFLLSSRTML HLVRRPPQGF EGFVKDHFRR RGRYVLRMCE AYLKGCVPVE EGGMELPCSA GFNIALANVV PRLMAAFTKV GDEGSDLSST TTQ
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.