Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G206600.1 | Wheat | cytosol | 65.07 | 63.95 |
| Os05t0153132-00 | Rice | cytosol | 60.7 | 53.05 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 43.67 | 29.24 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 44.98 | 27.25 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 42.79 | 26.63 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 44.98 | 22.84 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 42.79 | 21.63 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 48.47 | 20.94 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 49.78 | 20.39 |
| TraesCS1D01G125200.2 | Wheat | plastid | 45.41 | 19.96 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 73.8 | 18.93 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 71.62 | 16.86 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 70.74 | 16.51 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 70.74 | 16.2 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 69.43 | 15.9 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 69.0 | 15.71 |
| OQU79703 | Sorghum | cytosol | 58.08 | 15.41 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 47.6 | 12.85 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 47.6 | 12.76 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 54.15 | 11.14 |
| KRH36075 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G289700.1 | EnsemblPlantsGene:TraesCS4D01G289700 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PFAM:PF00179 | PFscan:PS50127 | SMART:SM00212 | SUPFAM:SSF54495 |
| TIGR:cd00195 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:460776617..460777306
Molecular Weight (calculated)
25623.6 Da
IEP (calculated)
5.762
GRAVY (calculated)
-0.093
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MYADTIYVQA FEDRMDLLRV AMVGASGTPY QDGLFFFDLQ MPPSYPDVPP QVYYHAFGFR LNPNLYTDGT VCLSLLNTFS GEGTEVWVPG TSSLLQVVVS
101: IQALVLNSQP FYNEAGYEHL IDRPEGHRHE LPYNENAFLL TLRTMIHLLR RPPQGFDGFV MDHFRRRGRS VLETCEAYLQ GCVDAGHGSM ELPCSTGFRT
201: ALANVMPKLT TAFAQIGALG CDHCTTTKH
101: IQALVLNSQP FYNEAGYEHL IDRPEGHRHE LPYNENAFLL TLRTMIHLLR RPPQGFDGFV MDHFRRRGRS VLETCEAYLQ GCVDAGHGSM ELPCSTGFRT
201: ALANVMPKLT TAFAQIGALG CDHCTTTKH
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.