Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G013600.1 | Wheat | cytosol | 81.55 | 86.96 |
| TraesCS7D01G206600.1 | Wheat | cytosol | 17.53 | 73.82 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 16.51 | 70.74 |
| Os05t0153132-00 | Rice | cytosol | 16.31 | 61.07 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 52.4 | 51.4 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 49.54 | 48.6 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 46.99 | 47.38 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 48.11 | 46.92 |
| OQU79703 | Sorghum | cytosol | 36.29 | 41.25 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 13.86 | 39.77 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 14.27 | 37.04 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 31.5 | 36.44 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 13.56 | 36.14 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 27.93 | 32.08 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 36.09 | 31.81 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 14.58 | 31.71 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 14.37 | 31.13 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 16.31 | 30.19 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 16.82 | 29.52 |
| TraesCS1D01G125200.2 | Wheat | plastid | 14.68 | 27.64 |
| KRH36075 | Soybean | nucleus | 12.03 | 22.35 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G051900.1 | EnsemblPlantsGene:TraesCS2D01G051900 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:-:19643140..19646816
Molecular Weight (calculated)
107830.0 Da
IEP (calculated)
5.000
GRAVY (calculated)
-0.291
Length
981 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAVAEDALA SSTNIHQIQE GDLGRVGPKG DHGMVAHLPG LYYTGQPLLP AATFRIFRVD GTMETAEARD ITIIDRGYFR SGQFVVSASD IHGRVGVVTE
101: SNTTLDLVKL VGHGEPPVMA MTGVAPGCLR RVRELCLGDF VVSGPWLGRV VKVPLELDVV FDDGALCRVI GGTPLTKLCP VVATNKRIFR DRMKSSFYPG
201: LRVTSPADGF KYCRWLRGYW KPSRKVGTIA KVLIMGALVH WIASAHHGAD PRLVQESAPP AYQDPADLTF FCSAYDCYWG VGDRCFLRDT QEQGPKEENT
301: MHHRKLLHLD GRRRTRQRQP AEIEQPMSVA STRTTVDVLW QDGTRQSGVP STCLLPYQMT SEHEFFPGFY VVDGVAPGAN AAADDVPVVD NATGAQTTET
401: RRVGTVRCVN SEDQTVGVSW FKESSSPDEA TEIDTVSAYD LALQPGPHAF YGHVVIRRPP SGYPDASEVR AAADLSWVGH VVDLVDGRVQ VKWADSTVSM
501: VVPDEIRIVT ELYYWELEAE MVGDGDDWVE VNSVDHEHED EDSANSLYNE KENPPEGSNV QGDIDSANEE DNDSVDEDES AATKASRKVA IIQYMSQLAR
601: QVLAQTMRYF GNRLLSSSLG SELAGGTANE GAHVAVPDGH HSTSNHDAIH AIPAALTSND TCADDDGCAE KVKNIEHPTG DEDQFHFPYF DVTHSPLDHH
701: YIDNVGQGPS GGKRWVKAVQ KEWKILENNN LPDTIYVRVF EDRMDLLRAV IVGASGTPYH DGIFFFDLHL PPSYPDVPPM VYYHSFGLRL NPNLYNSGTV
801: CLSLLNTFGG EASEVWSPAT SSLLQVAVSI QGLILNDQPY YNEAGYQSLV YKPEGCRNAL PYNENAYLLT LRTMLHLLRR PPSGFEGFVK DHFCRRGRFI
901: LRACEAYLRG CVVGMLDGDS CATKGSKEDR SCSTGLRLAL SNVLPKLVAA LAEIGAEGCE CDKFHELHDL LIGGDGVQRA Y
101: SNTTLDLVKL VGHGEPPVMA MTGVAPGCLR RVRELCLGDF VVSGPWLGRV VKVPLELDVV FDDGALCRVI GGTPLTKLCP VVATNKRIFR DRMKSSFYPG
201: LRVTSPADGF KYCRWLRGYW KPSRKVGTIA KVLIMGALVH WIASAHHGAD PRLVQESAPP AYQDPADLTF FCSAYDCYWG VGDRCFLRDT QEQGPKEENT
301: MHHRKLLHLD GRRRTRQRQP AEIEQPMSVA STRTTVDVLW QDGTRQSGVP STCLLPYQMT SEHEFFPGFY VVDGVAPGAN AAADDVPVVD NATGAQTTET
401: RRVGTVRCVN SEDQTVGVSW FKESSSPDEA TEIDTVSAYD LALQPGPHAF YGHVVIRRPP SGYPDASEVR AAADLSWVGH VVDLVDGRVQ VKWADSTVSM
501: VVPDEIRIVT ELYYWELEAE MVGDGDDWVE VNSVDHEHED EDSANSLYNE KENPPEGSNV QGDIDSANEE DNDSVDEDES AATKASRKVA IIQYMSQLAR
601: QVLAQTMRYF GNRLLSSSLG SELAGGTANE GAHVAVPDGH HSTSNHDAIH AIPAALTSND TCADDDGCAE KVKNIEHPTG DEDQFHFPYF DVTHSPLDHH
701: YIDNVGQGPS GGKRWVKAVQ KEWKILENNN LPDTIYVRVF EDRMDLLRAV IVGASGTPYH DGIFFFDLHL PPSYPDVPPM VYYHSFGLRL NPNLYNSGTV
801: CLSLLNTFGG EASEVWSPAT SSLLQVAVSI QGLILNDQPY YNEAGYQSLV YKPEGCRNAL PYNENAYLLT LRTMLHLLRR PPSGFEGFVK DHFCRRGRFI
901: LRACEAYLRG CVVGMLDGDS CATKGSKEDR SCSTGLRLAL SNVLPKLVAA LAEIGAEGCE CDKFHELHDL LIGGDGVQRA Y
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.