Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G051900.1 | Wheat | cytosol | 86.96 | 81.55 |
| Os05t0153132-00 | Rice | cytosol | 16.63 | 58.4 |
| OQU79703 | Sorghum | cytosol | 36.09 | 38.47 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 30.87 | 33.49 |
| KRH36075 | Soybean | nucleus | 10.98 | 19.13 |
Protein Annotations
| EnsemblPlants:TraesCSU01G013600.1 | EnsemblPlantsGene:TraesCSU01G013600 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrUn:+:16719010..16722720
Molecular Weight (calculated)
100996.0 Da
IEP (calculated)
4.623
GRAVY (calculated)
-0.248
Length
920 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAVAEDAVA SSTNIHQIQE GDLVRVGPNG DHGMVAHLPE LYYTGQPLLP AATFRIFRVD GTMETAEARD ITIIDRGYFR SGQFVVSASD IHGRVGVVTE
101: SNTTLDLVKV VSHGEPPVMA MSGVAPGCLR RVRELCLGDF VVSGSSRCPS SSAWCLTMAP SASFYPGLRV TSRADGFKYC RWLRGYWKPS RKVGTIAKVQ
201: MTGALVHWIA SAHHGADQWL VQESAPPAYQ DPADLTFFCS AYDCYWGPTR KLLQLDGRRR TRQRQPVEVE QPMSVASTRT TVDVLWQDGT SQSGVPSTAL
301: LPYQMTSEHE FFPGFYVVDG VAPAADAVAV VDDATEQTTE KKRVGVVRCV NSEDQTVGVS WLTEATEIDT LSAYDLALQP GPHVFYGRVV VRRPPSGCPP
401: DDAAATDLSW VGHVVDLVDG RVQVKWADNT VSLVLPHEIS IVTEQYFWEL EAEMGGVGDD WVEVNSVDDE CEDEDSANSA YNELQNPPER INVQGDIDSA
501: TEEDDDSVDE DDSAATKASR KGAIIEYMSQ LGHQVLAQTM RYFGNRLLLS SLGSELAGAT ANEGANVAVT DGHHSTSNHD VIHAMAAALT SSDTCTNDDD
601: CAERGKNIEQ ATGDEDQFRF PYFDVTHSPL DHHYIDNAGQ GTSGGKRWVK AVQKEWKILE NNNLPDTIYV RVFEDRMDLL RAVIVGASGT PYHDGLFFFD
701: LHLPPSYPDM PPMVYYHSFG LRLNPNLYNS GTVCLSLLNT FGGEASEVWS PSTSSLLQAV VSIQGLILND QPYYNEVGYQ APVDKPEGCR NALPYNENAY
801: LLTLWTMLHL FCRPPCGFEG FIKDHFCRRG RFILRACEAY LRGCVVGMLD GDACATKGSK DDRSCSAGLR LALSNMLPKL VAALAEIGAE GCECDQFHEL
901: HDLLIGGDRV QRCSLNYQVH
101: SNTTLDLVKV VSHGEPPVMA MSGVAPGCLR RVRELCLGDF VVSGSSRCPS SSAWCLTMAP SASFYPGLRV TSRADGFKYC RWLRGYWKPS RKVGTIAKVQ
201: MTGALVHWIA SAHHGADQWL VQESAPPAYQ DPADLTFFCS AYDCYWGPTR KLLQLDGRRR TRQRQPVEVE QPMSVASTRT TVDVLWQDGT SQSGVPSTAL
301: LPYQMTSEHE FFPGFYVVDG VAPAADAVAV VDDATEQTTE KKRVGVVRCV NSEDQTVGVS WLTEATEIDT LSAYDLALQP GPHVFYGRVV VRRPPSGCPP
401: DDAAATDLSW VGHVVDLVDG RVQVKWADNT VSLVLPHEIS IVTEQYFWEL EAEMGGVGDD WVEVNSVDDE CEDEDSANSA YNELQNPPER INVQGDIDSA
501: TEEDDDSVDE DDSAATKASR KGAIIEYMSQ LGHQVLAQTM RYFGNRLLLS SLGSELAGAT ANEGANVAVT DGHHSTSNHD VIHAMAAALT SSDTCTNDDD
601: CAERGKNIEQ ATGDEDQFRF PYFDVTHSPL DHHYIDNAGQ GTSGGKRWVK AVQKEWKILE NNNLPDTIYV RVFEDRMDLL RAVIVGASGT PYHDGLFFFD
701: LHLPPSYPDM PPMVYYHSFG LRLNPNLYNS GTVCLSLLNT FGGEASEVWS PSTSSLLQAV VSIQGLILND QPYYNEVGYQ APVDKPEGCR NALPYNENAY
801: LLTLWTMLHL FCRPPCGFEG FIKDHFCRRG RFILRACEAY LRGCVVGMLD GDACATKGSK DDRSCSAGLR LALSNMLPKL VAALAEIGAE GCECDQFHEL
901: HDLLIGGDRV QRCSLNYQVH
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.