CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90672	Soybean	nucleus	94.32	44.31
TraesCS2B01G590700.1	Wheat	cytosol	23.86	19.38
TraesCS2B01G590500.1	Wheat	cytosol	22.16	19.09
KRH10881	Soybean	nucleus	24.81	14.18
TraesCS2B01G596800.1	Wheat	cytosol	24.81	14.04
KRH21442	Soybean	nucleus	24.24	13.93
TraesCS2D01G600300.1	Wheat	cytosol, endoplasmic reticulum, nucleus	25.57	13.87
TraesCS2A01G403400.1	Wheat	cytosol	25.76	13.72
KRH50043	Soybean	cytosol	24.05	13.7
TraesCS3D01G015300.1	Wheat	plasma membrane	25.76	13.52
KRH20454	Soybean	cytosol, nucleus, peroxisome	23.86	13.5
TraesCS2D01G400600.1	Wheat	nucleus	25.38	13.4
TraesCS3B01G029100.1	Wheat	cytosol, nucleus, plasma membrane	25.19	13.39
TraesCS2A01G586300.1	Wheat	nucleus	24.62	13.36
TraesCS3B01G029000.1	Wheat	cytosol, nucleus, plasma membrane	24.81	13.23
TraesCS3A01G031600.1	Wheat	cytosol	24.81	13.14
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	21.02	13.09
TraesCS3A01G030400.1	Wheat	plasma membrane	24.62	13.04
TraesCS3D01G015200.1	Wheat	cytosol	24.24	12.8
TraesCS2B01G421500.1	Wheat	golgi, mitochondrion, plasma membrane	23.48	12.73
TraesCS5B01G359000.1	Wheat	cytosol	21.21	12.54
TraesCS2B01G461900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	24.05	12.26
TraesCS2D01G051900.1	Wheat	cytosol	22.35	12.03
OQU79703	Sorghum	cytosol	18.37	11.24
TraesCSU01G013600.1	Wheat	cytosol	19.13	10.98
KRH22096	Soybean	cytosol	3.22	2.35
KRH42541	Soybean	nucleus	2.08	2.32
KRH58633	Soybean	cytosol, nucleus	1.89	2.23
KRH27240	Soybean	cytosol	2.65	1.99
KRH55293	Soybean	cytosol, peroxisome, plastid	1.89	1.15
TraesCS7D01G206600.1	Wheat	cytosol	0.19	0.43
TraesCS7B01G110500.1	Wheat	cytosol, plastid, vacuole	0.19	0.43
KRH26135	Soybean	cytosol	0.0	0.0
KRH02367	Soybean	cytosol, golgi, nucleus	0.0	0.0
KRH02368	Soybean	cytosol	0.0	0.0
TraesCS4D01G289700.1	Wheat	cytosol	0.0	0.0
KRH02369	Soybean	cytosol	0.0	0.0
TraesCS3B01G029300.1	Wheat	peroxisome	0.0	0.0
TraesCS2A01G441700.1	Wheat	cytosol	0.0	0.0
KRH26136	Soybean	cytosol	0.0	0.0
TraesCS3A01G030200.1	Wheat	endoplasmic reticulum	0.0	0.0
KRH50716	Soybean	nucleus	0.0	0.0
Os05t0153132-00	Rice	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A0R0I7X0	EMBL:ACUP02006719	EnsemblPlantsGene:GLYMA_10G282000	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	EnsemblPlants:KRH36075	ProteinID:KRH36075	ProteinID:KRH36075.1
PANTHER:PTHR44422	PANTHER:PTHR44422:SF1	UniParc:UPI0006EDC6C6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:50299752..50301335

Molecular Weight (calculated)

57365.6 Da

IEP (calculated)

4.315

GRAVY (calculated)

-0.566

Length

528 amino acids

Sequence
(BLAST)

001: MGVQQHEALS EGNEPAENAC ASGFLNQGAL ASESAYSDPR VNTESSEVNE PGDNSYKESN TPHIYRQDVV KNTISGMIGI VTEVAGDSDS DSDSSVTDDE
101: NDTEDEDGDD EEGDGINNAS RNSESNGAAG HCKTDALLAD QLHVLWMDKS ESTLNFSDVE VVDRGFLHGD FVAAASDPTG RVGVVVDVNI CVDLLAHDGS
201: IIKDVSSKNL KRIRDFTVGD YVVLGHWLGR IDDVLDNVTV LFDDGSVCKV SKADPLNLKP ISKNILEDGH FPYYPGQWVR ASSSSVFKNS RWLSGLWKAN
301: RLEGTVTKVT VGSVFVYWIA SAGYGPYSST APAEEQSPKN LKLLSCFAHA NWQLGDWCLL PSSELSSSAS MDKGISKLEL NNSANNELDS NQTGSGCDSE
401: EATVEETNGN KDTMDLDPAD VLEGNDGNDK SNPSRDSSSC SSSISVSKEP VHEAWPLHRK KIRKVVIRKD KRARKKEESF EKALLIANTR TKVDVAWQDG
501: TVERELNSTS LIPIDNPGDH EFVSEQYV

Best Arabidopsis Sequence Match ( AT2G16920.1 )
(BLAST)

0001: MEHEQDDPGT STNVGVDSSV DDSMASLSIC DSEHPNIYRQ DIVKNKKTGS VGVVSEVAGD SDSDSDISDE EEDDDDDEDN DDDDEDVEEG KKASEENVVN
0101: GDGEKKADGN YKCGALEGDQ IRVLWMDNTE PVQDINDVTV IDRGFLHGDY VASASEPTGQ VGVVVDVNIS VDLLAPDGSI HKDISTKNLK RVRDFAVGDY
0201: VVHGPWLGRI DDVLDNVTVL FDDGSMCKVL RVEPLRLKPI PKNNLEEDAN FPYYPGQRVK ASSSSVFKNS RWLSGLWKPN RLEGTVTKVT AGSIFVYWIA
0301: SAGFGPDSSV SPPEEQNPSN LTLLSCFTHA NWQVGDWCLL PSLNQSATIP LHKHVSKLRL YDSQADRQQK IGRDLEDVQD EVSGKVEPAG ITAEALPKVT
0401: SDDPPQRNPS VSKEPVHEPW PLHRKKIRKL VIRKDKKVKK KEESFEQALL VVNSRTRVDV SWQDGTIECR REAITLIPIE TPGDHEFVSE QYVVEKTSDD
0501: GDNTTEPRRA GVVKNVNAKD RTASVRWLNP LRRAEEPREF EKEEIVSVYE LEGHPDYDYC YGDVVVRLSP IAVALPASSP GNSFEEATQQ DNGYQDSESH
0601: QEAKILVDKE ENEPSTDLSK LSWVGNITGL KDGDIEVTWA DGTISTVGPH AVYVVGRDDD DESVAGESET SDAASWETLN DDDRGAPEIP EEDLGRSSSI
0701: EGNSDADIYA ENDSGRNGAL ALPLAAIEFV TRLASGIFSR ARKSVDSSSS DYTVENVYKQ AESTNPSDET DSLDDPSPSK VNVTDNCESK GTQANAKNIL
0801: SGETSTFLED EDKPVPSEGD SCSFRRFDIS QDPLDHHFLG VDGQKTKERQ WFKKVDQDWK ILQNNLPDGI FVRAYEDRMD LLRAVIVGAF GTPYQDGLFF
0901: FDFHLPSDYP SVPPSAYYHS GGWRLNPNLY EEGKVCLSLL NTWTGRGNEV WDPKSSSILQ VLVSLQGLVL NSKPYFNEAG YDKQVGTAEG EKNSLGYNEN
1001: TFLLNCKTMM YLMRKPPKDF EELIKDHFRK RGYYILKACD AYMKGYLIGS LTKDASVIDE RSSANSTSVG FKLMLAKIAP KLFSALSEVG ADCNEFQHLQ
1101: QQ

Arabidopsis Description

UBC23Probable ubiquitin-conjugating enzyme E2 23 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.