Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 21.05 | 97.21 |
| TraesCS3B01G029000.1 | Wheat | cytosol, nucleus, plasma membrane | 95.17 | 95.45 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 18.23 | 84.19 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 17.32 | 73.82 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 65.36 | 62.64 |
| Os05t0153132-00 | Rice | cytosol | 15.51 | 58.78 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 51.96 | 52.98 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 47.23 | 52.52 |
| TraesCS2B01G596800.1 | Wheat | cytosol | 47.63 | 50.7 |
| TraesCS2B01G590500.1 | Wheat | cytosol | 29.61 | 47.96 |
| TraesCS2B01G590700.1 | Wheat | cytosol | 30.01 | 45.85 |
| OQU79703 | Sorghum | cytosol | 36.86 | 42.41 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 14.3 | 37.67 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 31.52 | 36.91 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 13.6 | 36.68 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 36.46 | 32.5 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 14.5 | 31.86 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 14.4 | 31.57 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 16.11 | 30.19 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 25.48 | 29.98 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 16.52 | 29.23 |
| TraesCS1B01G146400.2 | Wheat | plastid | 15.21 | 29.09 |
| KRH36075 | Soybean | nucleus | 13.39 | 25.19 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G029100.1 | EnsemblPlantsGene:TraesCS3B01G029100 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:-:12839465..12843097
Molecular Weight (calculated)
109522.0 Da
IEP (calculated)
4.392
GRAVY (calculated)
-0.323
Length
993 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVPAAASP NLYLLDLVSS GPKLIDRGLV LPDGEVDNIY LPVDTFQLLR IDDTVVYKNI SDITVVDRSH LYPGQVVGSA SDMGGQIGVV TGVNTMLNLA
101: KLDNKGLPIK VIRGVSPSSL RRIRSLNLGD FVVSGPWLGR VVEVSIDIDV LFDDGAVCRV TDAESKNLVG VCVNRHTRHR HQMNSIFHQG QSVGGPDACS
201: IFKAARWLNG YWHPEQDLGT IMKLETSGVL VYWVASMHCG TDKELLEASA PPAYQNPDDL TFFCASYNCC WGLADRCFFL ETCSNEGGGA CSPDQHDDDD
301: DDDDDDGDDD DEEEDEEEEY NACSEDNQEE CEASTSQVLP PTKQKDPRFY RKQLRKLVFE GHRRAQRSQV MRHVEVEFPM LVANTRTTVD VVWQDGTRQQ
401: GRPSATIVPF GIWNEQEFFP GQHVVANVLP VNSAVDATAD VTTTSVNSDI DASGTGPAER VGIVKSMQHE DQTVCVSWFK TPGHPDEAME VECDDTVSAY
501: DLRLDSSHSA YYGDIVIRIV PSVSTDDGGS APLSQGNKKK NVVPADLSWV GRVVELPNGH VQVKWGDGSM STVSPHEIVV IKDEHYMELW LEMGDWVEDN
601: GVDDAPEEPV AANTDIDLQN LDNDVESVGP AMSRTRLLGL SFWSFLQLTS DMVARGKGYL MNWRSSSSSL PSSELPTPIN DDSIGGAAVE TSDAAVDVTS
701: HGFDGGPKAA GATCCSDESL CFPRFDVLQI SPLDHHYLDT TDQGASRAKS WAKAVQKEWK ILENDLPGTI YVRAFEDRMD LLRVVMVGAS GTPYHDGLFF
801: FDLQLPPSYP DAPPQVYYHS FGLRLNPNLY ESGTVCLSLL NTFGGEGTEV WSSTESSLLQ VVVSIQGLVL NDKPYYNETG YETMVDKPEG RRNALPYSEN
901: AYLLTLRTML HLLRRPPQGF EEFVKEHFRH RGRFVLRACN AWLQGNMVDN AHATEVSRKQ PCSAGLRLAL TKVVPSLVAA FTEIRAEGCE EYQ
101: KLDNKGLPIK VIRGVSPSSL RRIRSLNLGD FVVSGPWLGR VVEVSIDIDV LFDDGAVCRV TDAESKNLVG VCVNRHTRHR HQMNSIFHQG QSVGGPDACS
201: IFKAARWLNG YWHPEQDLGT IMKLETSGVL VYWVASMHCG TDKELLEASA PPAYQNPDDL TFFCASYNCC WGLADRCFFL ETCSNEGGGA CSPDQHDDDD
301: DDDDDDGDDD DEEEDEEEEY NACSEDNQEE CEASTSQVLP PTKQKDPRFY RKQLRKLVFE GHRRAQRSQV MRHVEVEFPM LVANTRTTVD VVWQDGTRQQ
401: GRPSATIVPF GIWNEQEFFP GQHVVANVLP VNSAVDATAD VTTTSVNSDI DASGTGPAER VGIVKSMQHE DQTVCVSWFK TPGHPDEAME VECDDTVSAY
501: DLRLDSSHSA YYGDIVIRIV PSVSTDDGGS APLSQGNKKK NVVPADLSWV GRVVELPNGH VQVKWGDGSM STVSPHEIVV IKDEHYMELW LEMGDWVEDN
601: GVDDAPEEPV AANTDIDLQN LDNDVESVGP AMSRTRLLGL SFWSFLQLTS DMVARGKGYL MNWRSSSSSL PSSELPTPIN DDSIGGAAVE TSDAAVDVTS
701: HGFDGGPKAA GATCCSDESL CFPRFDVLQI SPLDHHYLDT TDQGASRAKS WAKAVQKEWK ILENDLPGTI YVRAFEDRMD LLRVVMVGAS GTPYHDGLFF
801: FDLQLPPSYP DAPPQVYYHS FGLRLNPNLY ESGTVCLSLL NTFGGEGTEV WSSTESSLLQ VVVSIQGLVL NDKPYYNETG YETMVDKPEG RRNALPYSEN
901: AYLLTLRTML HLLRRPPQGF EEFVKEHFRH RGRFVLRACN AWLQGNMVDN AHATEVSRKQ PCSAGLRLAL TKVVPSLVAA FTEIRAEGCE EYQ
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.