Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 93.25 | 89.41 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 92.18 | 88.39 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 17.15 | 68.67 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 15.65 | 67.91 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 56.59 | 59.13 |
| Os05t0153132-00 | Rice | cytosol | 16.08 | 57.25 |
| TraesCS3B01G029100.1 | Wheat | cytosol, nucleus, plasma membrane | 50.7 | 47.63 |
| TraesCS3B01G029000.1 | Wheat | cytosol, nucleus, plasma membrane | 50.27 | 47.37 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 49.3 | 47.23 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 49.3 | 44.4 |
| OQU79703 | Sorghum | cytosol | 37.08 | 40.09 |
| TraesCS2B01G590500.1 | Wheat | cytosol | 24.76 | 37.68 |
| TraesCS2B01G590700.1 | Wheat | cytosol | 24.97 | 35.85 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 32.37 | 35.61 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 13.18 | 32.63 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 12.22 | 30.98 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 36.66 | 30.7 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 26.9 | 29.74 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 16.4 | 28.87 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 13.83 | 28.54 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 17.04 | 28.34 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 13.72 | 28.26 |
| TraesCS1B01G146400.2 | Wheat | plastid | 14.47 | 26.01 |
| KRH36075 | Soybean | nucleus | 14.04 | 24.81 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G596800.1 | EnsemblPlantsGene:TraesCS2B01G596800 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg | SMART:SM00212 |
| SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:780012618..780017150
Molecular Weight (calculated)
101631.0 Da
IEP (calculated)
4.747
GRAVY (calculated)
-0.305
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAVAVAAP TTNLYGQDLV SFQSKLGILA PSTWLSHPAD ELLMLGIDGL PFTKEAGDTD IALVDRSFLH VGQAVVSASD VGGQIGVVTG VTTTLDLVDR
101: GGEATGEVIG GLPPSAVRRV RALSLGDYVV SGQGQWLGRV VEVSLDVDVV FDDGAICRVT DAESPTMQLW PAESTPGLHR QQTNVTFYPG QRVTSGDPSV
201: VFRGARWLSG HWRTRHEVGT VTKVEMAGVL VHWIACAYGD TDEQFHHESA PPAYQNPENL MYFCCAYECS WGVGDRCFLR ESTAASPSSE IDSPHDPHHQ
301: SSLQSDDSSS SDEEEEVEPS PPSLTAGLAT APVDKEERFY RKQLRKAMFV RHGGRARRGY QPPEPLRTMT VSRTRTTVDV LWQDGTRQHG VPSTSLNPFE
401: MMNEHEVFPG QYVVDARDDD FTGVSTGRRV GVVGNLNSKD HTAHVSWFKA ASGGWEMECD DEAVSVYDLG RDPDHSVFYG DVVVRTLSSN VTGNNARQPQ
501: VLDLSWVGRV VDLSDGHIQV KWGNDTTSMV LPHEITVASK EHYSELQAEM GDWLEEDSVD NHQESGAADV DNDPTDVRNI QGARVEDGGS SANESDGHAA
601: MRTNRLGGVI QSMIRSAIQV LARAKLYLVN HTSTSISDLP AATMHNVVEV SAHVALGGSH VDPSMEGTVT EVVFPPVTRS DENGDGDVED AGSSNGGKSW
701: VKTVQKEWKI LEDSLPDTIY VRAYEDRMDL LRAAMMGASG TPYQHGLFFF DLQLPPSYPA VPPRVYYRSF GLRLNPNLYP SGTVCLSLLN TFGGEGTEVW
801: SPGTSSLLQV VVSLQALVLN GQPYYNEAGH ETLVDTPEGR RNALPYSENA FLLTLRTALH LLRQPPRGFE GFVTDHFRQR GRRVLMACDA YLRGCIHADE
901: GGMELPCSTG FRIALANLVP RLVAAFTNMG TQG
101: GGEATGEVIG GLPPSAVRRV RALSLGDYVV SGQGQWLGRV VEVSLDVDVV FDDGAICRVT DAESPTMQLW PAESTPGLHR QQTNVTFYPG QRVTSGDPSV
201: VFRGARWLSG HWRTRHEVGT VTKVEMAGVL VHWIACAYGD TDEQFHHESA PPAYQNPENL MYFCCAYECS WGVGDRCFLR ESTAASPSSE IDSPHDPHHQ
301: SSLQSDDSSS SDEEEEVEPS PPSLTAGLAT APVDKEERFY RKQLRKAMFV RHGGRARRGY QPPEPLRTMT VSRTRTTVDV LWQDGTRQHG VPSTSLNPFE
401: MMNEHEVFPG QYVVDARDDD FTGVSTGRRV GVVGNLNSKD HTAHVSWFKA ASGGWEMECD DEAVSVYDLG RDPDHSVFYG DVVVRTLSSN VTGNNARQPQ
501: VLDLSWVGRV VDLSDGHIQV KWGNDTTSMV LPHEITVASK EHYSELQAEM GDWLEEDSVD NHQESGAADV DNDPTDVRNI QGARVEDGGS SANESDGHAA
601: MRTNRLGGVI QSMIRSAIQV LARAKLYLVN HTSTSISDLP AATMHNVVEV SAHVALGGSH VDPSMEGTVT EVVFPPVTRS DENGDGDVED AGSSNGGKSW
701: VKTVQKEWKI LEDSLPDTIY VRAYEDRMDL LRAAMMGASG TPYQHGLFFF DLQLPPSYPA VPPRVYYRSF GLRLNPNLYP SGTVCLSLLN TFGGEGTEVW
801: SPGTSSLLQV VVSLQALVLN GQPYYNEAGH ETLVDTPEGR RNALPYSENA FLLTLRTALH LLRQPPRGFE GFVTDHFRQR GRRVLMACDA YLRGCIHADE
901: GGMELPCSTG FRIALANLVP RLVAAFTNMG TQG
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.