Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G596800.1 | Wheat | cytosol | 89.41 | 93.25 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 91.16 | 91.16 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 16.86 | 71.62 |
| TraesCS7D01G206600.1 | Wheat | cytosol | 16.55 | 69.1 |
| Os05t0153132-00 | Rice | cytosol | 15.52 | 57.63 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 52.83 | 51.4 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 50.57 | 49.2 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 50.05 | 48.41 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 47.38 | 46.99 |
| OQU79703 | Sorghum | cytosol | 37.62 | 42.41 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 32.27 | 37.03 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 12.95 | 36.84 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 13.57 | 34.92 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 12.74 | 33.7 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 36.49 | 31.9 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 14.29 | 30.82 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 26.82 | 30.56 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 16.55 | 30.38 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 13.87 | 29.8 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 16.75 | 29.16 |
| TraesCS1D01G125200.2 | Wheat | plastid | 14.49 | 27.06 |
| KRH36075 | Soybean | nucleus | 13.87 | 25.57 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G600300.1 | EnsemblPlantsGene:TraesCS2D01G600300 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:-:651068105..651072052
Molecular Weight (calculated)
105973.0 Da
IEP (calculated)
4.566
GRAVY (calculated)
-0.315
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAVAVAVA APTTNLYGQD LVSFQSKLGI LAPSTWLSHP ADELLMLGID GLPFTKEAGD TDIALVDRSF LHVGQSVVSA SDVGGQIGVV TGVTTTLDLV
101: DRGGEAIGEV IGGLPPSAVR RVRALSLGDY VVSGQGQWLG RVVEVSLDVD VVFDDGAICR VTDAESPTVQ LWPAESTPGL HRQQTNVTFY PGLSVTSGDP
201: SVVFRGARWL SGHWKTRREA GTVTKVEMAG VLVHWVASAY GDTDEQFHHE SAPPAYQNPE NLTYFCCAYE CSWGVGDRCF LQESTAASPS SEIDSLHDPH
301: HQSSLQSDDS SSSEEEEEVE PAPPSLTAGL ATAPVDKEER FYRKQLRKPM FVRHKGRARR GYQLQPEPLR TMTVSRTRTT VDVLWQDGTR QHGVPSTSLN
401: PFDMMNEHEV FPGQYVIDAR DDDDFTAEST ERLIGVVRNL NSKDHTAHVS WFKAASGGWE VECDDEAVSV YDLGRDPDHS VFYGDVVVRT LSSNVSGNNA
501: RQPQVLDLSW VGRVVDFSDG HIQVKWGDDT TSMVLPHEII VASKEHYSQL QAEMGDWVEE DSVDTHQESG DAAVDNDPTD TRNIQGARVE DGGSSANESD
601: GHAATRTNRL GGVIQSMIRS VVQVLARAKL YLVNRTSSST SDLPAAAMHN VVEVPTHVSV GGSHEDPNIG GAATEVVFAL VTRSDENGES DVEDAVTSGE
701: DATGDDDALN FPKFDVVQSP PDHHYLDNMD QGSSKGGKSW VKTVQKEWKI LEDSLPDTIY VRAYEDRMDL LRAAMVGASG TPYQHGLFFF DLQLPPSYPA
801: VPPQVYYRSF GLRLNPNLYP SGTVCLSLLN TFGGEGTEVW SPGTSSLLQV VVSLQALILN GQPYYNEAGH ETLVDTPEGR RNALPYSENA FLLTLRTALH
901: LLRQPPRGFE GFVTDHFRQR GRHVLMACDA YLRGCIHADE GGMELPCSTG FRIALANLVP RLVAAFTNMG TQG
101: DRGGEAIGEV IGGLPPSAVR RVRALSLGDY VVSGQGQWLG RVVEVSLDVD VVFDDGAICR VTDAESPTVQ LWPAESTPGL HRQQTNVTFY PGLSVTSGDP
201: SVVFRGARWL SGHWKTRREA GTVTKVEMAG VLVHWVASAY GDTDEQFHHE SAPPAYQNPE NLTYFCCAYE CSWGVGDRCF LQESTAASPS SEIDSLHDPH
301: HQSSLQSDDS SSSEEEEEVE PAPPSLTAGL ATAPVDKEER FYRKQLRKPM FVRHKGRARR GYQLQPEPLR TMTVSRTRTT VDVLWQDGTR QHGVPSTSLN
401: PFDMMNEHEV FPGQYVIDAR DDDDFTAEST ERLIGVVRNL NSKDHTAHVS WFKAASGGWE VECDDEAVSV YDLGRDPDHS VFYGDVVVRT LSSNVSGNNA
501: RQPQVLDLSW VGRVVDFSDG HIQVKWGDDT TSMVLPHEII VASKEHYSQL QAEMGDWVEE DSVDTHQESG DAAVDNDPTD TRNIQGARVE DGGSSANESD
601: GHAATRTNRL GGVIQSMIRS VVQVLARAKL YLVNRTSSST SDLPAAAMHN VVEVPTHVSV GGSHEDPNIG GAATEVVFAL VTRSDENGES DVEDAVTSGE
701: DATGDDDALN FPKFDVVQSP PDHHYLDNMD QGSSKGGKSW VKTVQKEWKI LEDSLPDTIY VRAYEDRMDL LRAAMVGASG TPYQHGLFFF DLQLPPSYPA
801: VPPQVYYRSF GLRLNPNLYP SGTVCLSLLN TFGGEGTEVW SPGTSSLLQV VVSLQALILN GQPYYNEAGH ETLVDTPEGR RNALPYSENA FLLTLRTALH
901: LLRQPPRGFE GFVTDHFRQR GRHVLMACDA YLRGCIHADE GGMELPCSTG FRIALANLVP RLVAAFTNMG TQG
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.